Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26m06
         (695 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               24   1.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.7  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   6.4  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 367 MKQGNEVSY-NNY-CFSTFNLSDGNHLPSDAIRCARLPVLAIKKN 495
           + +GN   Y  NY CF T  L   + + +D I+  +L  +A +KN
Sbjct: 63  ISEGNIKKYLTNYSCFITCALEKSHIIQNDEIQLDKLVEMANRKN 107


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 89  HHCKHYAVYGASEIPCQ 39
           HH  H+A+ G S   C+
Sbjct: 282 HHANHHAILGHSGFLCE 298


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 182 RIKHGLP*SCTCLIVLCEKG 123
           + K+G+  S  C IV C KG
Sbjct: 45  KCKYGIAMSSACGIVQCAKG 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,292
Number of Sequences: 438
Number of extensions: 4638
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)