Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l23
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96491-1|AAB72148.1|  318|Drosophila melanogaster RACK1 protein.       29   5.8  
AY071661-1|AAL49283.1|  318|Drosophila melanogaster RE74715p pro...    29   5.8  
AE014134-1351|AAF52566.1|  318|Drosophila melanogaster CG7111-PA...    29   5.8  
AY058563-1|AAL13792.1|  652|Drosophila melanogaster LD25239p pro...    29   7.6  
AE014296-1420|AAF50445.2|  652|Drosophila melanogaster CG7185-PA...    29   7.6  

>U96491-1|AAB72148.1|  318|Drosophila melanogaster RACK1 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 285 PEMRNPILRMSWWERNRKYRPTTSCKAESEHHTGESHY 398
           P   NPI+    W+R  K     +CK ++ HH G + Y
Sbjct: 159 PNHSNPIIVSCGWDRTVKVWNLANCKLKNNHH-GHNGY 195


>AY071661-1|AAL49283.1|  318|Drosophila melanogaster RE74715p
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 285 PEMRNPILRMSWWERNRKYRPTTSCKAESEHHTGESHY 398
           P   NPI+    W+R  K     +CK ++ HH G + Y
Sbjct: 159 PNHSNPIIVSCGWDRTVKVWNLANCKLKNNHH-GHNGY 195


>AE014134-1351|AAF52566.1|  318|Drosophila melanogaster CG7111-PA
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 285 PEMRNPILRMSWWERNRKYRPTTSCKAESEHHTGESHY 398
           P   NPI+    W+R  K     +CK ++ HH G + Y
Sbjct: 159 PNHSNPIIVSCGWDRTVKVWNLANCKLKNNHH-GHNGY 195


>AY058563-1|AAL13792.1|  652|Drosophila melanogaster LD25239p
           protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 183 PVRTVRAMRPVRTVRAVRSLCALQAMRTVRPVPVPEMRNP 302
           P + +    PV T  + ++L   ++++  RPVP P+   P
Sbjct: 157 PKKEMHGQAPVVTYPSKQALTQFESLQKTRPVPPPQQNGP 196


>AE014296-1420|AAF50445.2|  652|Drosophila melanogaster CG7185-PA
           protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 183 PVRTVRAMRPVRTVRAVRSLCALQAMRTVRPVPVPEMRNP 302
           P + +    PV T  + ++L   ++++  RPVP P+   P
Sbjct: 157 PKKEMHGQAPVVTYPSKQALTQFESLQKTRPVPPPQQNGP 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.313    0.129    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,105,033
Number of Sequences: 53049
Number of extensions: 539823
Number of successful extensions: 1498
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)