Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l23
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    28   0.070
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    28   0.070
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    28   0.070
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    26   0.38 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    26   0.38 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   1.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.1  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 586 LENKPNAWDAIVNKQSP 636
           +ENKP  WD++ NK  P
Sbjct: 95  VENKPELWDSLANKYDP 111


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 586 LENKPNAWDAIVNKQSP 636
           +ENKP  WD++ NK  P
Sbjct: 95  VENKPELWDSLANKYDP 111


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 586 LENKPNAWDAIVNKQSP 636
           +ENKP  WD++ NK  P
Sbjct: 95  VENKPELWDSLANKYDP 111


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 14/57 (24%), Positives = 22/57 (38%)
 Frame = +1

Query: 466 GLSTPQPADAXXXXXXVISSLVCPYSTQAPGSAEAVSNCTLENKPNAWDAIVNKQSP 636
           G  TP  A+        + +   P S +    A+ V    ++NKP  W  +  K  P
Sbjct: 54  GPCTPDAAELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDP 110



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 589 ENKPNAWDAIVNKQSPCSRQASSCA 663
           E K N  DA+ N+ SPCS +    A
Sbjct: 62  ELKRNLPDALENECSPCSEKQKKIA 86


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 14/57 (24%), Positives = 22/57 (38%)
 Frame = +1

Query: 466 GLSTPQPADAXXXXXXVISSLVCPYSTQAPGSAEAVSNCTLENKPNAWDAIVNKQSP 636
           G  TP  A+        + +   P S +    A+ V    ++NKP  W  +  K  P
Sbjct: 54  GPCTPDAAELKRNLPDALENECSPCSEKQKKIADKVVQFLIDNKPEIWVLLEAKYDP 110



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 589 ENKPNAWDAIVNKQSPCSRQASSCA 663
           E K N  DA+ N+ SPCS +    A
Sbjct: 62  ELKRNLPDALENECSPCSEKQKKIA 86


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 297 NPILRMSWWERNRKYRPTTS 356
           N I R  WW R R+   TTS
Sbjct: 38  NNIKRKRWWSRPREPAQTTS 57


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 541 YTDKPGMRLLEASASWRR 488
           YTDK   + +  S+ WR+
Sbjct: 204 YTDKSNEKKIPKSSGWRK 221


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.129    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,100
Number of Sequences: 438
Number of extensions: 3186
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)