Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l20
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   3.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   4.0  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   5.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.9  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   6.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.1  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 517 AYRITNCYLQFH 552
           AY++  CY++FH
Sbjct: 111 AYQLVKCYVEFH 122


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +3

Query: 555 ITMFVSMWITNTAATTMMVPINSALLKVFE--DQNSLKMYE 671
           I  F  +W+ ++      VP+ +  L VF+    N LK  E
Sbjct: 130 IDKFDRLWVLDSGLVNRTVPVCAPKLHVFDLKTSNHLKQIE 170


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 606 MVPINSALLKVFEDQNSLKMYEPNKNG 686
           ++ IN+A    FED+ ++ +YE   NG
Sbjct: 22  IIGINAANFSNFEDRVTMYVYEEIING 48


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 451 WLLLSSNLDFINDWHFGP*ELLAYRI 528
           WL  S N D + +W+ G   +L+ +I
Sbjct: 661 WLNHSPNYDQVTNWYMGWKGMLSEKI 686


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 681 SYWVHTFLKSFGLQKL 634
           +YW   F  SFG  KL
Sbjct: 78  TYWAFGFAMSFGTDKL 93


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 670 NPIRTVIWLR 699
           NPI+TV WL+
Sbjct: 334 NPIKTVSWLK 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,159
Number of Sequences: 438
Number of extensions: 4584
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)