Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26l17
(391 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 147 2e-36
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 147 2e-36
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 147 2e-36
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 147 2e-36
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 146 4e-36
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 145 1e-35
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 144 2e-35
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 144 2e-35
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 144 2e-35
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 144 2e-35
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 144 2e-35
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 144 2e-35
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 143 5e-35
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 137 2e-33
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 137 2e-33
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 135 1e-32
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 132 8e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 66 8e-12
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 64 3e-11
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 64 3e-11
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 64 3e-11
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 64 3e-11
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 64 3e-11
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 46 1e-05
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 46 1e-05
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 30 0.50
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 1.5
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 1.5
U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-rela... 27 4.7
AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell death-re... 27 4.7
Z78542-8|CAB54233.1| 90|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 27 6.2
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 27 6.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 147 bits (357), Expect = 2e-36
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG+DS
Sbjct: 428 LEKDYEEVGVDS 439
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 147 bits (357), Expect = 2e-36
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 367 LAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 426
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG+DS
Sbjct: 427 LEKDYEEVGVDS 438
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 147 bits (357), Expect = 2e-36
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG+DS
Sbjct: 428 LEKDYEEVGVDS 439
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 147 bits (357), Expect = 2e-36
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG+DS
Sbjct: 428 LEKDYEEVGVDS 439
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 146 bits (355), Expect = 4e-36
Identities = 66/72 (91%), Positives = 72/72 (100%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
L+K+QRAVCMLSNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 373 LSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 432
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG+D+
Sbjct: 433 LEKDYEEVGLDA 444
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 145 bits (351), Expect = 1e-35
Identities = 65/72 (90%), Positives = 71/72 (98%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
+AK+QRAVCMLSNTTAI EAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AA
Sbjct: 368 MAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG+DS
Sbjct: 428 LEKDYEEVGVDS 439
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 144 bits (349), Expect = 2e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAA
Sbjct: 366 LAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 425
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 426 LEKDYEEVGADS 437
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 144 bits (349), Expect = 2e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAA
Sbjct: 366 LAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 425
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 426 LEKDYEEVGADS 437
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 144 bits (349), Expect = 2e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAA
Sbjct: 366 LAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 425
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 426 LEKDYEEVGADS 437
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 144 bits (349), Expect = 2e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAA
Sbjct: 366 LAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 425
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 426 LEKDYEEVGADS 437
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 144 bits (349), Expect = 2e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAA
Sbjct: 366 LAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 425
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 426 LEKDYEEVGADS 437
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 144 bits (349), Expect = 2e-35
Identities = 67/72 (93%), Positives = 70/72 (97%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAA
Sbjct: 366 LAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 425
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 426 LEKDYEEVGADS 437
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 143 bits (346), Expect = 5e-35
Identities = 66/72 (91%), Positives = 69/72 (95%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
+AKV RAVCMLSNTTAIAEAW RL++KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 363 MAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 422
Query: 181 LEKDYEEVGMDS 216
LEKDYEEVG DS
Sbjct: 423 LEKDYEEVGADS 434
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 137 bits (332), Expect = 2e-33
Identities = 61/71 (85%), Positives = 67/71 (94%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
L K R+VCM+SNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AA
Sbjct: 374 LGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 433
Query: 181 LEKDYEEVGMD 213
LEKDYEE+G D
Sbjct: 434 LEKDYEEIGED 444
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 137 bits (332), Expect = 2e-33
Identities = 61/71 (85%), Positives = 67/71 (94%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
L K R+VCM+SNTTAIAEAW+RL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEARED+AA
Sbjct: 346 LGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 405
Query: 181 LEKDYEEVGMD 213
LEKDYEE+G D
Sbjct: 406 LEKDYEEIGED 416
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 135 bits (326), Expect = 1e-32
Identities = 61/72 (84%), Positives = 67/72 (93%)
Frame = +1
Query: 1 LAKVQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 180
LAKV RAVCMLSNTTAIAEAW+RL+HKFDLMY+KRAFVHW+VGEGMEEGEF EAR+DLAA
Sbjct: 371 LAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAA 430
Query: 181 LEKDYEEVGMDS 216
LEKDY EV D+
Sbjct: 431 LEKDYAEVSRDT 442
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 132 bits (319), Expect = 8e-32
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +1
Query: 22 VCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 201
VCMLS+TTAIAEAWSRL++KFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEE
Sbjct: 10 VCMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
Query: 202 VGMDS 216
VG DS
Sbjct: 70 VGADS 74
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 66.1 bits (154), Expect = 8e-12
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 189
V+ A + N+TAI E + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 VKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 190 DYEE 201
+Y++
Sbjct: 421 EYQQ 424
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 64.5 bits (150), Expect = 3e-11
Identities = 25/64 (39%), Positives = 44/64 (68%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 189
++ A + N+TAI E + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 190 DYEE 201
+Y++
Sbjct: 421 EYQQ 424
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 64.5 bits (150), Expect = 3e-11
Identities = 25/64 (39%), Positives = 44/64 (68%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 189
++ A + N+TAI E + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLIS 420
Query: 190 DYEE 201
+Y++
Sbjct: 421 EYQQ 424
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 64.1 bits (149), Expect = 3e-11
Identities = 24/64 (37%), Positives = 44/64 (68%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 189
++ + + N+TAI E + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 190 DYEE 201
+Y++
Sbjct: 421 EYQQ 424
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 64.1 bits (149), Expect = 3e-11
Identities = 24/64 (37%), Positives = 44/64 (68%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 189
++ + + N+TAI E + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 190 DYEE 201
+Y++
Sbjct: 421 EYQQ 424
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 64.1 bits (149), Expect = 3e-11
Identities = 24/64 (37%), Positives = 44/64 (68%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 189
++ + + N+TAI E + R++ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 190 DYEE 201
+Y++
Sbjct: 421 EYQQ 424
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 180
++ + ++N+TAI E R++ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 181 LEKDYEEV 204
+ YE+V
Sbjct: 416 EFQQYEKV 423
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 45.6 bits (103), Expect = 1e-05
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 10 VQRAVCMLSNTTAIAEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAA 180
++ + ++N+TAI E R++ +F ++ ++AF+HWY MEE EF++A DL +
Sbjct: 359 LKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLIS 415
Query: 181 LEKDYEEV 204
+ YE+V
Sbjct: 416 EFQQYEKV 423
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 30.3 bits (65), Expect = 0.50
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 117 MHECTLGIHQIKLVVEARPRLCYGSSIGQ-HAHGALHLR 4
MH TLG+HQ +V+ R R+ S G ++HG + R
Sbjct: 521 MHMLTLGVHQSPIVITTRIRMLRSDSQGSLNSHGRSNSR 559
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 28 MLSNTTAIAEAWSRLNHKFDLMYAKRAFV 114
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 28 MLSNTTAIAEAWSRLNHKFDLMYAKRAFV 114
+L+N+T++A + L K+D + +KRAF+
Sbjct: 375 LLNNSTSVAPLFESLLSKYDKLRSKRAFI 403
>U41270-2|AAA82440.1| 298|Caenorhabditis elegans Cell-death-related
nuclease protein4 protein.
Length = 298
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +1
Query: 82 FDLMYAKRAFVHWYVGEGMEEGEFS---EAREDL 174
FD++Y + F W + G+EEG+F+ ++R+DL
Sbjct: 85 FDVVYEQ--FQQWLITLGLEEGKFAFVCDSRQDL 116
>AY303578-1|AAP57300.1| 298|Caenorhabditis elegans cell
death-related nuclease 4 protein.
Length = 298
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Frame = +1
Query: 82 FDLMYAKRAFVHWYVGEGMEEGEFS---EAREDL 174
FD++Y + F W + G+EEG+F+ ++R+DL
Sbjct: 85 FDVVYEQ--FQQWLITLGLEEGKFAFVCDSRQDL 116
>Z78542-8|CAB54233.1| 90|Caenorhabditis elegans Hypothetical
protein F20D1.10 protein.
Length = 90
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 261 IVKLIFLAAFSLALTGIHSHLFVVFLEGGQI 169
++KLIF++A SL + G+ +H +LE +I
Sbjct: 50 VLKLIFVSASSLYIGGLIAHKGASYLEENEI 80
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 52 AEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 204
A++W + FD M K A + V ++ E EDL +++K+ +++
Sbjct: 177 AKSWKTIEDLFDEMQRKMALLAQNVRISDQQLEVFIGTEDLKSIQKEVDQI 227
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 52 AEAWSRLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 204
A++W + FD M K A + V ++ E EDL +++K+ +++
Sbjct: 177 AKSWKTIEDLFDEMQRKMALLAQNVRISDQQLEVFIGTEDLKSIQKEVDQI 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,384,299
Number of Sequences: 27780
Number of extensions: 158177
Number of successful extensions: 586
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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