Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26l15
(673 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0194 + 23139587-23140249 46 2e-05
03_05_1081 + 30235677-30236474 44 1e-04
05_02_0054 - 6175324-6175905 43 2e-04
11_01_0046 + 355692-356354 42 4e-04
01_01_0679 - 5213354-5213360,5215051-5215622 40 0.001
12_01_0048 + 413959-414621 38 0.006
03_06_0312 - 33068457-33069149 38 0.010
11_06_0723 - 26688378-26688385,26689351-26689569,26690100-266901... 31 0.63
01_06_1203 - 35401189-35401626,35401723-35401857 31 0.84
07_03_1235 - 25066236-25066451 29 2.6
04_04_0551 + 26191629-26192174 29 3.4
07_01_0554 - 4121692-4121895,4121991-4122148,4123241-4123354,412... 28 5.9
03_05_1105 + 30438140-30438350,30438448-30438926 28 5.9
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 28 5.9
01_06_0937 + 33175966-33178020 28 7.8
>05_05_0194 + 23139587-23140249
Length = 220
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +2
Query: 257 LSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLLI 436
LS RRPWT+ V F P S+ + R RN+ YF+ NY V L+ P L+
Sbjct: 55 LSDRRPWTELVDRSAFSRPDSLSDATSRLRRNLAYFRVNYAAVVAFALGASLLAHPFSLL 114
Query: 437 TMV 445
++
Sbjct: 115 VLL 117
>03_05_1081 + 30235677-30236474
Length = 265
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 254 VLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLL 433
++++RRPW + F P S+ R RN YF+ANY + L + A L+ P L
Sbjct: 93 LIAARRPWGEVFRAPAFSRPPSVGEAVARARRNAAYFRANYALAVLAVVAASLLWHPGTL 152
Query: 434 ITMVA 448
++A
Sbjct: 153 FALLA 157
>05_02_0054 - 6175324-6175905
Length = 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/130 (26%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Frame = +2
Query: 257 LSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLLI 436
L+ RRPW + VP + RR N+ +F NY IV L + L+ P+ LI
Sbjct: 40 LAERRPWRELADPRAASVPRGLGGAYRRARANLGHFSMNYAIVVLAVVFLSLLWHPVSLI 99
Query: 437 TMVASFFGYRKL-TSGPNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGAT 613
+A + L + G + + + + ++ L L GA + L
Sbjct: 100 VFLACMVAWLFLYFLRDEPLALCGRAVGEGAVLAVLSVLTLVLLLLTGATVNILTSLLVG 159
Query: 614 VTVVALHASF 643
V +V LHA F
Sbjct: 160 VVIVLLHAVF 169
>11_01_0046 + 355692-356354
Length = 220
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 4/133 (3%)
Frame = +2
Query: 257 LSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPL--- 427
LS RPW + + P S+ R +N+ YF+ NY + A L+ P
Sbjct: 54 LSGARPWPELIDRSALSRPESLSDAGARLRKNLAYFRVNYAAIVALSLAATLLAHPFSLA 113
Query: 428 -LLITMVASFFGYRKLTSGPNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVL 604
LL + A F Y S G + + S + +L G+++F L
Sbjct: 114 ALLALLAAWCFLYLLRPSDAPPLAAFGRTFSDRETLGGLIVASAFVVFLTSVGSLIFSAL 173
Query: 605 GATVTVVALHASF 643
+V H +F
Sbjct: 174 ALGAAIVCAHGAF 186
>01_01_0679 - 5213354-5213360,5215051-5215622
Length = 192
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 1/134 (0%)
Frame = +2
Query: 257 LSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLLI 436
L++RRPW + +P S+ R N+ ++ NY IV L + L+ P LI
Sbjct: 48 LATRRPWRELADPHALGLPPSLADAYLRVRANLAHYAMNYAIVVLAVVFLSLLWHPASLI 107
Query: 437 TMVASFFGYRKL-TSGPNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGAT 613
+ + L + G + AA ++ L L GA A + L
Sbjct: 108 VFLVCMVAWLVLYFLRDEPIVLFGRVVGDGAVLAALAAVTLVLLLLTGATANIVSSLLIG 167
Query: 614 VTVVALHASFFDAE 655
V +V LHA+ AE
Sbjct: 168 VLLVVLHAALHKAE 181
>12_01_0048 + 413959-414621
Length = 220
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 4/133 (3%)
Frame = +2
Query: 257 LSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPL--- 427
LS RPW + + S+ R +N+ YF+ NY + A L+ P
Sbjct: 54 LSGARPWPELIDRSALSHSESLSDSGARLRKNLAYFRVNYAAIVALSLAASLLAHPFSLA 113
Query: 428 -LLITMVASFFGYRKLTSGPNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVL 604
LL + A F Y S G + + S + +L G+++F L
Sbjct: 114 ALLALLAAWCFLYLLRPSDAPPLAAFGRTFSDRETLGGLIVASAFVIFLTSVGSLIFSAL 173
Query: 605 GATVTVVALHASF 643
+V H +F
Sbjct: 174 ALGAAIVCAHGAF 186
>03_06_0312 - 33068457-33069149
Length = 230
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 269 RPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLLITMVA 448
R W + + F P S R RN+ YF+ANY + L L L+ P+ ++ +A
Sbjct: 73 RAWREVLDATAFSRPESCGEARARARRNLAYFRANYALAALVLVFLGLVYRPVSMLAFLA 132
Query: 449 SFFGYRKLTSG 481
F + L G
Sbjct: 133 LFAAWLGLYFG 143
>11_06_0723 -
26688378-26688385,26689351-26689569,26690100-26690106,
26690194-26690256,26690329-26690400,26690507-26691681,
26692024-26692626,26692643-26692781
Length = 761
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 364 KIFYVTIESSRQSWYRYWYLKVVSGNKLCPWPA*R*NSHQQCRSRTTTYMLQQQFCIIHI 185
K+ Y T+ SRQ +Y S NK P P+ R QQC ++ Y+ ++FCI +
Sbjct: 78 KVRYFTLACSRQGKAQY-----TSTNKFKPNPSTR----QQCPAKVNFYLHDEKFCISTL 128
Query: 184 LLE 176
L+
Sbjct: 129 TLD 131
>01_06_1203 - 35401189-35401626,35401723-35401857
Length = 190
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 287 VATDNFKVPVSIPRLSRRFYRNIEYFQANYLIVFLGLFAYCLITSPLLLITMVASFFGY 463
+AT F++ +S + R RN+ YF+ NY V A L+ P L+ ++A G+
Sbjct: 37 LATPAFRLFLS--EATSRLRRNLAYFRVNYAAVVAFSLAASLLAHPFSLLVLLAILGGW 93
>07_03_1235 - 25066236-25066451
Length = 71
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 254 VLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLIV 385
++++RRPW + F S+ + N YF+ANY +V
Sbjct: 6 LIAARRPWGEAFRAPAFSKSPSVGEAIAKARWNTAYFRANYALV 49
>04_04_0551 + 26191629-26192174
Length = 181
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 458 GYRKLTSGPNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGATVTVV 625
G R+ +S GGW+ +++Q+V AA + L +A A A ++G V V+
Sbjct: 21 GRRQRSSWARATGAGGWDWERSRQFVPAATAASWLATVAAASA--NGIIGTRVCVI 74
>07_01_0554 -
4121692-4121895,4121991-4122148,4123241-4123354,
4123824-4124082
Length = 244
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 136 INLYIFRHFRDFLILCTVYKYYLVGTLFIILFWLYVL 26
+ LYIF F++LC +Y Y+ + +IL L+ +
Sbjct: 74 LGLYIFLIILPFIVLCPLYYYHQKHPVNLILLGLFTV 110
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -1
Query: 130 LYIFRHFRDFLILCTVYKYYL---VGTLFIILFWLYVLFNI 17
LYIF F++LC +Y YY V L + LF + F +
Sbjct: 60 LYIFLIILPFIVLCPLYYYYQRHPVNLLLLALFTAAISFAV 100
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 493 EDWWLGVNENTAVCYSCCRIHG 558
E W G++ +TAVC C +HG
Sbjct: 587 ESGWTGIDCSTAVCDEQCSLHG 608
>01_06_0937 + 33175966-33178020
Length = 684
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 272 ACVKIKLPSTMQEPHHYVHAATTILHHSH 186
A + P + +PHH++HAA HH+H
Sbjct: 3 AALVTSFPHAIPKPHHHLHAA----HHAH 27
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,187,804
Number of Sequences: 37544
Number of extensions: 392872
Number of successful extensions: 1198
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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