Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l15
         (673 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542116-1|CAG46913.1|  185|Homo sapiens RABAC1 protein.              122   1e-27
CR457214-1|CAG33495.1|  185|Homo sapiens RABAC1 protein.              122   1e-27
BT019964-1|AAV38767.1|  185|Homo sapiens Rab acceptor 1 (prenyla...   122   1e-27
BC008950-1|AAH08950.1|  185|Homo sapiens RABAC1 protein protein.      122   1e-27
AF112202-1|AAF17190.1|  185|Homo sapiens prenylated rab acceptor...   122   1e-27
AJ133534-1|CAB43107.1|  185|Homo sapiens prenylated Rab acceptor...   122   2e-27
AF112996-1|AAP97229.1|  184|Homo sapiens prenylated RAB acceptor...   121   3e-27
BC107850-1|AAI07851.1|   65|Homo sapiens LOC652203 protein protein.    31   3.8  
CR457023-1|CAG33304.1|  178|Homo sapiens JM4 protein.                  30   6.6  
BC021213-1|AAH21213.1|  178|Homo sapiens PRA1 domain family, mem...    30   6.6  
AJ005896-1|CAA06753.1|  178|Homo sapiens JM4 protein.                  30   6.6  
BC109121-1|AAI09122.1|  711|Homo sapiens F-box protein 34 protein.     30   8.7  
BC109120-1|AAI09121.1|  711|Homo sapiens F-box protein 34 protein.     30   8.7  
BC095482-1|AAH95482.2|  711|Homo sapiens F-box protein 34 protein.     30   8.7  

>CR542116-1|CAG46913.1|  185|Homo sapiens RABAC1 protein.
          Length = 185

 Score =  122 bits (294), Expect = 1e-27
 Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L    ++ RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 21  LLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 80

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 81  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGIS 139

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 140 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179


>CR457214-1|CAG33495.1|  185|Homo sapiens RABAC1 protein.
          Length = 185

 Score =  122 bits (294), Expect = 1e-27
 Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L    ++ RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 21  LLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 80

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 81  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGIS 139

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 140 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179


>BT019964-1|AAV38767.1|  185|Homo sapiens Rab acceptor 1
           (prenylated) protein.
          Length = 185

 Score =  122 bits (294), Expect = 1e-27
 Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L    ++ RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 21  LLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 80

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 81  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGIS 139

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 140 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179


>BC008950-1|AAH08950.1|  185|Homo sapiens RABAC1 protein protein.
          Length = 185

 Score =  122 bits (294), Expect = 1e-27
 Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L    ++ RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 21  LLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 80

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 81  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGIS 139

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 140 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179


>AF112202-1|AAF17190.1|  185|Homo sapiens prenylated rab acceptor 1
           protein.
          Length = 185

 Score =  122 bits (294), Expect = 1e-27
 Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L    ++ RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 21  LLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 80

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 81  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGIS 139

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 140 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179


>AJ133534-1|CAB43107.1|  185|Homo sapiens prenylated Rab acceptor 1
           (PRA1) protein.
          Length = 185

 Score =  122 bits (293), Expect = 2e-27
 Identities = 65/160 (40%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L    ++ RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 21  LLPKLIPSGAGREWLERRRATIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 80

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 81  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPEHQYALAGGIS 139

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 140 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179


>AF112996-1|AAP97229.1|  184|Homo sapiens prenylated RAB acceptor 1
           protein.
          Length = 184

 Score =  121 bits (291), Expect = 3e-27
 Identities = 65/160 (40%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
 Frame = +2

Query: 203 LLLQHVRSGAAPALLMGVLSSRRPWTQFVATDNFKVPVSIPRLSRRFYRNIEYFQANYLI 382
           LL + + SGA    L       RPW+ FV    F  P ++  L +R  RN+EY+Q+NY+ 
Sbjct: 20  LLPKLIPSGAGREWLERRRGPIRPWSTFVDQQRFSRPRNLGELCQRLVRNVEYYQSNYVF 79

Query: 383 VFLGLFAYCLITSPLLLITMVASFFG---YRKLTSGPNTWKIGGWELTKTQQYVIAAAGS 553
           VFLGL  YC++TSP+LL+ + A FFG      L +  +   + G E++   QY +A   S
Sbjct: 80  VFLGLILYCVVTSPMLLVAL-AVFFGACYILYLRTLESKLVLFGREVSPAHQYALAGGIS 138

Query: 554 MALCWLAGAGAVLFWVLGATVTVVALHASFFDAEALPNLE 673
               WLAGAG+ +FWVLGAT+ V+  HA+F   EA+   E
Sbjct: 139 FPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 178


>BC107850-1|AAI07851.1|   65|Homo sapiens LOC652203 protein protein.
          Length = 65

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 641 SLHEGRLRLPLHLKPRIKRLQLQQANRVPW 552
           +LHEGR+R PL LK   K L   + N   W
Sbjct: 18  ALHEGRVRRPLWLKDMYKPLSATRVNNHAW 47


>CR457023-1|CAG33304.1|  178|Homo sapiens JM4 protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
 Frame = +2

Query: 311 PVSIPRLSRRFYRNIEYFQANYLIVF---LGLFAYCLITSPLLLITMVASFFGYRKLTSG 481
           P    R   R   N+ Y+Q NYL+ F   L L  Y      LL   +VA   G     + 
Sbjct: 27  PCDPQRWCHRVINNLLYYQTNYLLCFGIGLALAGYVRPLHTLLSALVVAVALGVLVWAAE 86

Query: 482 PNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGATVTVVALHAS 640
                                A  + + W+AG      + +   V ++ +HAS
Sbjct: 87  TRAAVRRCRRSHPAACLAAVLAVGLLVLWVAGGACTFLFSIAGPVLLILVHAS 139


>BC021213-1|AAH21213.1|  178|Homo sapiens PRA1 domain family, member
           2 protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
 Frame = +2

Query: 311 PVSIPRLSRRFYRNIEYFQANYLIVF---LGLFAYCLITSPLLLITMVASFFGYRKLTSG 481
           P    R   R   N+ Y+Q NYL+ F   L L  Y      LL   +VA   G     + 
Sbjct: 27  PCDPQRWCHRVINNLLYYQTNYLLCFGIGLALAGYVRPLHTLLSALVVAVALGVLVWAAE 86

Query: 482 PNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGATVTVVALHAS 640
                                A  + + W+AG      + +   V ++ +HAS
Sbjct: 87  TRAAVRRCRRSHPAACLAAVLAVGLLVLWVAGGACTFLFSIAGPVLLILVHAS 139


>AJ005896-1|CAA06753.1|  178|Homo sapiens JM4 protein.
          Length = 178

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
 Frame = +2

Query: 311 PVSIPRLSRRFYRNIEYFQANYLIVF---LGLFAYCLITSPLLLITMVASFFGYRKLTSG 481
           P    R   R   N+ Y+Q NYL+ F   L L  Y      LL   +VA   G     + 
Sbjct: 27  PCDPQRWCHRVINNLLYYQTNYLLCFGIGLALAGYVRPLHTLLSALVVAVALGVLVWAAE 86

Query: 482 PNTWKIGGWELTKTQQYVIAAAGSMALCWLAGAGAVLFWVLGATVTVVALHAS 640
                                A  + + W+AG      + +   V ++ +HAS
Sbjct: 87  TRAAVRRCRRSHPAACLAAVLAVGLLVLWVAGGACTFLFSIAGPVLLILVHAS 139


>BC109121-1|AAI09122.1|  711|Homo sapiens F-box protein 34 protein.
          Length = 711

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 146 EINATTEKK--GFQKYVNDAELLLQHVRSGAAPALLMGVLSSRRPW 277
           E++  T++     QK VND      H+ S   P+  +G  SSR+P+
Sbjct: 17  EVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPF 62


>BC109120-1|AAI09121.1|  711|Homo sapiens F-box protein 34 protein.
          Length = 711

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 146 EINATTEKK--GFQKYVNDAELLLQHVRSGAAPALLMGVLSSRRPW 277
           E++  T++     QK VND      H+ S   P+  +G  SSR+P+
Sbjct: 17  EVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPF 62


>BC095482-1|AAH95482.2|  711|Homo sapiens F-box protein 34 protein.
          Length = 711

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +2

Query: 146 EINATTEKK--GFQKYVNDAELLLQHVRSGAAPALLMGVLSSRRPW 277
           E++  T++     QK VND      H+ S   P+  +G  SSR+P+
Sbjct: 17  EVSRETQRTPMNHQKAVNDETCKASHITSSVFPSASLGKASSRKPF 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,433,670
Number of Sequences: 237096
Number of extensions: 2245675
Number of successful extensions: 13702
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13692
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)