Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l14
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   4.3  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   5.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.6  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 309 WTEDTVDNEHMNKKKSKCCCIYEKP 383
           W+ D   N  + +  S  C + EKP
Sbjct: 201 WSPDPAINRRLKETYSNMCALCEKP 225


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 309 WTEDTVDNEHMNKKKSKCCCIYEKP 383
           W+ D   N  + +  S  C + EKP
Sbjct: 201 WSPDPAINRRLKETYSNMCALCEKP 225


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 309 WTEDTVDNEHMNKKKSKCCCIYEKP 383
           W+ D   N  + +  S  C + EKP
Sbjct: 201 WSPDPAINRRLKETYSNMCALCEKP 225


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
 Frame = +3

Query: 432 HCFGHVERRHRHPPASTPAAQLAT---EAESPACITL-QPP--EPSPPD 560
           H   H    H H  A+TP  Q +T    +  PA I +   P   P PP+
Sbjct: 423 HSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHHHPHPPE 471


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 317 LGPDNLLPRFSPSRPQSY 264
           +GP  L PRF P  P +Y
Sbjct: 144 IGPSTLFPRFIP--PNAY 159


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 426 CEHCFGHVERRHRH 467
           CE  F H  + HRH
Sbjct: 153 CERAFEHSGKLHRH 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,456
Number of Sequences: 438
Number of extensions: 2710
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)