Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l12
         (222 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid...    28   6.2  
AK022762-1|BAB14233.1|  155|Homo sapiens protein ( Homo sapiens ...    28   6.2  
AC004932-1|AAQ96876.1|  155|Homo sapiens unknown protein.              28   6.2  
BC050424-1|AAH50424.1|  943|Homo sapiens FBXO38 protein protein.       27   8.2  
BC033454-1|AAH33454.1| 1113|Homo sapiens F-box protein 38 protein.     27   8.2  
BC005873-1|AAH05873.1|  768|Homo sapiens FBXO38 protein protein.       27   8.2  
BC005849-1|AAH05849.1|  768|Homo sapiens FBXO38 protein protein.       27   8.2  
AF251055-1|AAK34945.1|  772|Homo sapiens 5-HT receptor protein.        27   8.2  

>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
           rich nuclear protein isoform protein.
          Length = 1021

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 110 ISCSKIRS*CFVIPHPRVPQLPP 178
           +SCS+    C  + HPRVP L P
Sbjct: 502 LSCSEALVTCAALTHPRVPPLQP 524


>AK022762-1|BAB14233.1|  155|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12700 fis, clone NT2RP1000721. ).
          Length = 155

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 73  YPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTSTYSPS 195
           Y L  R  E   NLL      + R PP +   +P +T SPS
Sbjct: 74  YGLLQRRLENVENLLHNRNLWILRLPPGSKGESPKTTPSPS 114


>AC004932-1|AAQ96876.1|  155|Homo sapiens unknown protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 73  YPLCSRDYEITPNLLFKNQELVFRDPPSACAATPTSTYSPS 195
           Y L  R  E   NLL      + R PP +   +P +T SPS
Sbjct: 74  YGLLQRRLENVENLLHNRNFWILRLPPGSKGESPKTTPSPS 114


>BC050424-1|AAH50424.1|  943|Homo sapiens FBXO38 protein protein.
          Length = 943

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 97  EITPNLLFKNQELVFRDPPSACA 165
           E+ P+L F + + +FR+PP  CA
Sbjct: 450 ELLPSLEFISLDQMFREPPKGCA 472


>BC033454-1|AAH33454.1| 1113|Homo sapiens F-box protein 38 protein.
          Length = 1113

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 97  EITPNLLFKNQELVFRDPPSACA 165
           E+ P+L F + + +FR+PP  CA
Sbjct: 450 ELLPSLEFISLDQMFREPPKGCA 472


>BC005873-1|AAH05873.1|  768|Homo sapiens FBXO38 protein protein.
          Length = 768

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 97  EITPNLLFKNQELVFRDPPSACA 165
           E+ P+L F + + +FR+PP  CA
Sbjct: 30  ELLPSLEFISLDQMFREPPKGCA 52


>BC005849-1|AAH05849.1|  768|Homo sapiens FBXO38 protein protein.
          Length = 768

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 97  EITPNLLFKNQELVFRDPPSACA 165
           E+ P+L F + + +FR+PP  CA
Sbjct: 30  ELLPSLEFISLDQMFREPPKGCA 52


>AF251055-1|AAK34945.1|  772|Homo sapiens 5-HT receptor protein.
          Length = 772

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 97  EITPNLLFKNQELVFRDPPSACA 165
           E+ P+L F + + +FR+PP  CA
Sbjct: 109 ELLPSLEFISLDQMFREPPKGCA 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,781,062
Number of Sequences: 237096
Number of extensions: 713655
Number of successful extensions: 1425
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 76,859,062
effective HSP length: 52
effective length of database: 64,530,070
effective search space used: 1355131470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)