Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26l12
         (222 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81553-2|CAB04491.2|  373|Caenorhabditis elegans Hypothetical pr...    27   1.4  
U29154-2|AAA68418.2|  220|Caenorhabditis elegans Hypothetical pr...    27   1.4  
Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.     26   4.2  
Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical pr...    26   4.2  
Z92817-1|CAB07296.1|  367|Caenorhabditis elegans Hypothetical pr...    25   5.5  
U23455-6|AAC46536.2|  518|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AC025726-14|AAK73912.2|  508|Caenorhabditis elegans Hypothetical...    25   5.5  

>Z81553-2|CAB04491.2|  373|Caenorhabditis elegans Hypothetical
           protein F56H6.2 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 71  PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHI 187
           PTL  P +  L + +C K+ S    +     P+LPP+ I
Sbjct: 89  PTLPVPTLRMLNEPTCQKVFSSWLKVSKEPQPKLPPKKI 127


>U29154-2|AAA68418.2|  220|Caenorhabditis elegans Hypothetical
           protein T07F12.2 protein.
          Length = 220

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 109 NLLFKNQELVFRDPPSACAATPTSTYSPS 195
           N  F+N E+V  DP   C A     ++PS
Sbjct: 150 NKTFRNLEMVLADPVHGCEALRNEIFAPS 178


>Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.
          Length = 292

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 103 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 201
           T +L+ +NQ    R  P+  AATPT++ +PS +
Sbjct: 73  TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102


>Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 103 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 201
           T +L+ +NQ    R  P+  AATPT++ +PS +
Sbjct: 73  TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102


>Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 103 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 201
           T +L+ +NQ    R  P+  AATPT++ +PS +
Sbjct: 73  TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102


>Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 103 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 201
           T +L+ +NQ    R  P+  AATPT++ +PS +
Sbjct: 73  TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102


>Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 103 TPNLLFKNQELVFRDPPSACAATPTSTYSPSED 201
           T +L+ +NQ    R  P+  AATPT++ +PS +
Sbjct: 73  TVHLVIRNQA---RPTPAPAAATPTASSAPSSN 102


>Z92817-1|CAB07296.1|  367|Caenorhabditis elegans Hypothetical
           protein W08G11.1 protein.
          Length = 367

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 71  PTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHI 187
           PTL  P +  L + +C ++ S    I     P +PP+ I
Sbjct: 82  PTLPVPTLRMLNEPTCDEVFSEWLRISEEPQPDIPPKEI 120


>U23455-6|AAC46536.2|  518|Caenorhabditis elegans Hypothetical
           protein F55E10.7 protein.
          Length = 518

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -2

Query: 110 FGVIS*SREHRG*VCAFFEIRSITFYRSSAQWI 12
           FG+IS  R H   +   + + S+T+ +S+  W+
Sbjct: 325 FGLISKKRMHNIEIALIYILHSLTYAQSAFNWL 357


>AC025726-14|AAK73912.2|  508|Caenorhabditis elegans Hypothetical
           protein Y71G12B.13 protein.
          Length = 508

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +2

Query: 56  QKRHTPTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLVKIT*SN 214
           QK   P    P +  ++Q +  K R  C  IP PR+ +LP ++ +L  +T +N
Sbjct: 48  QKCQFPMDMPPHVYHVVQTAFQK-RQKC--IPLPRIEKLPEKYQYLYPLTFAN 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,948,772
Number of Sequences: 27780
Number of extensions: 116328
Number of successful extensions: 296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 12,740,198
effective HSP length: 53
effective length of database: 11,267,858
effective search space used: 225357160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)