BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26l11
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0590 + 22574985-22578018,22578125-22578469,22579171-225792... 32 0.38
05_01_0372 - 2913518-2916562,2916674-2917528 32 0.38
01_06_0784 + 31979670-31979976,31980092-31980337,31980428-319805... 32 0.51
03_01_0367 + 2852287-2852603,2853202-2853278,2853388-2853431,285... 31 0.67
06_03_0592 + 22585546-22588573,22588680-22589032 31 0.89
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 31 1.2
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867... 30 1.5
03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512 30 2.0
11_04_0453 - 17886095-17886868,17887928-17888043,17888300-178884... 29 3.6
10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018 29 4.7
03_05_0441 + 24350026-24350081,24350186-24351011,24351088-243511... 29 4.7
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 4.7
01_06_1180 + 35168811-35169089,35169224-35169287,35169401-35169570 29 4.7
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 28 6.2
06_03_0830 + 25159758-25162460 28 6.2
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 28 6.2
05_03_0633 + 16416913-16417009,16417976-16418060,16418398-164185... 28 6.2
04_04_1489 - 33938426-33939363,33939429-33939813 28 6.2
01_06_1427 + 37296883-37297588,37298504-37298658,37300596-37300955 28 6.2
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 28 8.3
07_03_1228 - 25009736-25010965 28 8.3
06_01_0735 + 5431900-5432044,5432137-5432271,5432710-5432750,543... 28 8.3
05_04_0132 + 18303925-18307164 28 8.3
03_02_0715 + 10621789-10623243,10624074-10625018 28 8.3
01_05_0716 + 24569177-24569462,24569818-24569938,24570033-245700... 28 8.3
>06_03_0590 + 22574985-22578018,22578125-22578469,22579171-22579217,
22579450-22579573,22579622-22579686
Length = 1204
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 364 KHILLHKDGNIHPSTLLHPG--DDSSRVEVTSEQTLVVNLALVIYHALDYTHAEDEERLI 537
K ++ H N + T LHP + S R +T Q +N+AL + ALDY H + ++
Sbjct: 900 KALVFHYKANGNLDTWLHPRAHEHSKRKTLTFSQR--INIALDVAFALDYLHNQCASPIV 957
Query: 538 SPDLE 552
DL+
Sbjct: 958 HCDLK 962
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 517 EDEERLISPDLEGLITEMTSCDLVDDDEECGALSEGSETSEGGRADTDDEGIERDSEPA 693
E +E + + EG+ + + DDDEE + E AD D++G+ D PA
Sbjct: 380 ETKENNVGQEDEGVAEVIDREEDADDDEEIVLAAADDEDDGTNEADDDEDGVSSDRGPA 438
>01_06_0784 +
31979670-31979976,31980092-31980337,31980428-31980544,
31980638-31980792,31980910-31980984,31981080-31981346,
31981436-31981756,31981858-31982271
Length = 633
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 273 LAYGRVERLQDLLEAD--AVRSVQRELRPAGRSGNTLAHHRAQPAGQ 139
LA+ + R++D+L AD A ++E PA N A H Q AG+
Sbjct: 513 LAFNVMSRIEDVLNADDHAREKAKKEAPPAPAMANDAAEHHHQQAGE 559
>03_01_0367 +
2852287-2852603,2853202-2853278,2853388-2853431,
2854294-2854440,2854528-2854596,2854770-2854868,
2855155-2855193
Length = 263
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = -3
Query: 334 RPQCISGSIAPTDSTVPRRAPRLWTS*TPPGSAGG*CSSKR--SA*TPSRRSLRQYPCAS 161
RP G A T P+ A + TPP S G +S SA +PS RS + P A+
Sbjct: 8 RPDDDGGRAASTFQRPPQPAGARPSLATPPPSGGAQSASTSGGSAGSPSSRSEQHVPAAA 67
Query: 160 SRSAGRPATIHP 125
+AG A P
Sbjct: 68 GMAAGAAAASTP 79
>06_03_0592 + 22585546-22588573,22588680-22589032
Length = 1126
Score = 31.1 bits (67), Expect = 0.89
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +1
Query: 385 DGNIHPSTLLHPG--DDSSRVEVTSEQTLVVNLALVIYHALDYTHAEDEERLISPDLE-- 552
+GN+ T LHP + S R +T Q +N+AL + ALDY H + L+ DL+
Sbjct: 907 NGNL--DTWLHPRAHEHSERKTLTFNQR--INIALDVAFALDYLHNQCASPLVHCDLKPS 962
Query: 553 GLITEMTSCDLVDDDEECGALSEGSETSEG 642
++ ++ V D L+ S EG
Sbjct: 963 NILLDLDMIAYVSDFGLARCLNNTSNAYEG 992
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = -1
Query: 276 LLAYGRVERLQDLLEADAVRSVQRELRPAGRSGNTLAHHRAQPAGQ--RPSILTYNVHNT 103
L+ YG V L + A AV + + L+ + +TL HH Q + L H+T
Sbjct: 358 LMQYGLVASLPSKVAASAVYAARLTLKKSPLWTDTLKHHTGFTESQLLDSAKLLVTSHST 417
Query: 102 TPIVPHFYSHKNFSQKYIVNVFLLSPCL 19
P +K +S + + V L SP +
Sbjct: 418 APESKLRVVYKKYSSEQLGGVALRSPAV 445
>03_05_0179 -
21583234-21584336,21586274-21586358,21586665-21586713,
21586801-21586874,21586958-21587050,21587120-21587174,
21587348-21587421,21587702-21587814,21587911-21588168,
21588915-21589012,21589139-21589256,21589754-21589848,
21590001-21590159,21590336-21590525,21590881-21591021,
21591142-21591176,21591659-21591699
Length = 926
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +1
Query: 409 LLHPGDDSSRVEVTSEQTLVVNLALVIYHALDYTHAEDEERLISPDLEGLITEMTSCDLV 588
LL P + + S ++L+++ A+V+ A+D + DL+ LI E+ D
Sbjct: 617 LLGPAFKGDLLPILSNRSLILHTAIVLPCIDRSIMADDMPPAVDDDLQELIDELMEDDAE 676
Query: 589 DDDEE---CGALSEGSE 630
D + E ALSE +E
Sbjct: 677 DREHEEISATALSEATE 693
>03_05_0866 - 28370034-28371352,28371447-28371995,28372507-28373512
Length = 957
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -1
Query: 375 QDMLRLGHQVTGVSVRNASLEASRRLIAQCPGVLLAYGR-VERLQDLLEADAVRSVQREL 199
QD L + H++ V R +LEA + I QC L + + LQ++L+ +R ++R
Sbjct: 881 QDKLAIAHEIDQVHERLHALEADKEFIKQCVRSLKKGDKGFDLLQEILQ--HLRDLRRIE 938
Query: 198 RPAGRSGNTLAHH 160
+ SG H+
Sbjct: 939 QRTRNSGELSPHY 951
>11_04_0453 -
17886095-17886868,17887928-17888043,17888300-17888423,
17889734-17889963,17891395-17891452
Length = 433
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 437 RLLSSPGCSKVLGCIFPSLCSKICLG 360
R++ + GC K+L C FP+L S + +G
Sbjct: 54 RMVVTDGCLKLLACSFPNLKSLVLVG 79
>10_06_0165 + 11380807-11383585,11383628-11383734,11383782-11384018
Length = 1040
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 412 LHPG-DDSSRVEV-TSEQTLVVNLALVIYHALDYTHAEDEERLISPDLE 552
+HP D SS VEV T Q L N+AL I ALDY H + ++ DL+
Sbjct: 831 IHPDIDPSSPVEVLTLMQRL--NIALDIGAALDYLHNNCQPAIVHCDLK 877
>03_05_0441 +
24350026-24350081,24350186-24351011,24351088-24351189,
24351278-24351343,24351418-24351483,24351594-24351800,
24351925-24352086
Length = 494
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 570 HLGDEPLEVGRDEPLLVLRVCVVQSMVYHEGQVHHQRLFRRNLYATAVISWMQQGAGMYI 391
++GD +G D+ L+ L C V + Q HH++L R A + + AG++
Sbjct: 10 NMGDASRTLGEDDNLIELLWC--NGHVVMQSQNHHRKLPPRPPEKAAAAAVQEDEAGLWF 67
Query: 390 P 388
P
Sbjct: 68 P 68
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 EDEER-LISPDLEGLITEMTSCDLVDDDEECGALSEGSETSEGGRADTDDEGIERDSE 687
+DE+ + S D E + + + ++DE + + + G D DDEG E D E
Sbjct: 515 QDEDLDVTSSDDEDFVADEEEVEDTEEDEYTDEDGDSDDDEDEGDEDDDDEGEEDDDE 572
>01_06_1180 + 35168811-35169089,35169224-35169287,35169401-35169570
Length = 170
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 517 EDEERLISPDLEGLITEMTSCDLVDDDEECGALSEGSE-TSEGGRADTDDEGIER 678
EDEE+ L G ITE V +++ L E E T +GGR + G R
Sbjct: 44 EDEEKGSKQSLFGSITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALR 98
>11_06_0223 - 21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 133 WSLAGRLSAMMRK-GIAGATGGTEFTLNASNCISLQQILEAFNSSISEEHAWALCYQSAR 309
W ++S+ + GAT F L A+NCI++Q ++ + E A + +
Sbjct: 1185 WQKGTKISSQQDLFNLLGATYAATFFLGAANCITVQPVVSIERTVFYRERAAGMYSSLSY 1244
Query: 310 CF-QRCI 327
F Q C+
Sbjct: 1245 AFAQACV 1251
>06_03_0830 + 25159758-25162460
Length = 900
Score = 28.3 bits (60), Expect = 6.2
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +1
Query: 403 STLLHPGDDSSRVEVTSEQTLVVNLALVIYHALDYTHAED--EERLISPDLEGLITEMTS 576
ST L DD+ +EV + V ++ Y + + D R SPDLE
Sbjct: 394 STPLAEYDDTDALEVARLVAIEVEREVIDYRG-PFCGSPDINSRRSDSPDLEARRQPEPP 452
Query: 577 CDLVDDDEECGALSEGSETS----EGGRADTDDEG 669
D D+D + E S +S E G TDD G
Sbjct: 453 MDEPDNDNKSSTTGEDSGSSSSMKEDGSGITDDSG 487
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 EDEER-LISPDLEGLITEMTSCDLVDDDEECGALSEGSETSEGGRADTDDEGIERDSE 687
+DE+ + S D E + + + +DE + + + G D DDEG E D E
Sbjct: 213 QDEDLDVTSSDDEDFVADEEEVEDTKEDEYTDEDGDSDDDEDEGEEDDDDEGEEDDDE 270
>05_03_0633 +
16416913-16417009,16417976-16418060,16418398-16418551,
16418808-16419023,16419105-16419241,16419317-16419408,
16419622-16419804,16421722-16421819,16422021-16422070,
16424605-16424756,16424944-16425069,16426315-16426523
Length = 532
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 487 IYHALDYTHAEDEERLISPDLEGLITEMTSCDLVDDDEECGALSEGSETSEGGRA 651
++HA D+ E +E + + + DLV++ E A +EG ET E A
Sbjct: 439 VWHAADFADGELKEEMFAIRFGSVENCKKFKDLVEEISESLAKTEGKETEEDSSA 493
>04_04_1489 - 33938426-33939363,33939429-33939813
Length = 440
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 427 DSSRVEVTSEQTLVVNLALVIYHALDYTHAEDEERLISPDLEGLITEM-TSCDLVDDDEE 603
D + +EV E+ N L I+H E + L+S G ++ SCDL+DD
Sbjct: 337 DHASLEVLYEELKTSNERLTIFHE---KLKEAHDNLLSTTQHGAHIDVGISCDLLDDSAT 393
Query: 604 C 606
C
Sbjct: 394 C 394
>01_06_1427 + 37296883-37297588,37298504-37298658,37300596-37300955
Length = 406
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 457 QTLVVNLALVIYHALDYT--HAEDEERLISPDLEGLITEMTSCDLVDDDEECGALSEGSE 630
Q ++VNL++ + D+T H ++EER + P LEG+ V D SE
Sbjct: 273 QEVLVNLSVRLKALQDHTKEHFKEEERELLPRLEGVRRMQREEGNVSDKSNTAWASEAMG 332
Query: 631 TSE 639
T E
Sbjct: 333 TME 335
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 507 HTRGGRGEAHLARPRGAHHRDD 572
H RGG G+ R R HHRDD
Sbjct: 38 HKRGGGGDDDDDRRRRRHHRDD 59
>07_03_1228 - 25009736-25010965
Length = 409
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Frame = +1
Query: 388 GNIHPSTLLHPGDDSSRVEVTSEQTLVVNLALVIYHALDYTHAE---DEERLISPDLEGL 558
G + S +L G ++ T E++ + + + ++ T+ E D+E P+ G
Sbjct: 243 GGVGNSHILETGATLNKESTTEERSTKIGESYIYETKVENTNEEMVDDDEGEEEPEEGGE 302
Query: 559 ITEMTSCDLVDDDEECGALS--EGSETSEGGRADTDDEGIERDSEP 690
E + +++EE E E EGG + ++E E + EP
Sbjct: 303 EEEEEEEEEEEEEEEEPEEGGEEEEEPEEGGEEEEEEEEEEEEEEP 348
>06_01_0735 +
5431900-5432044,5432137-5432271,5432710-5432750,
5433463-5433579,5433779-5433898,5433982-5434076,
5434149-5434242,5434592-5434723,5435191-5435303,
5435443-5435566,5435884-5436000,5436083-5436177,
5436269-5436362,5436655-5436780,5436854-5436966,
5437067-5437256,5437395-5437508,5437551-5437598
Length = 670
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 379 HKDGNIHPSTLLHPGDDSSRVEVT 450
H DGNI P L++ G S +EVT
Sbjct: 390 HNDGNIFPYLLVNIGSGVSMIEVT 413
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 511 HAEDEERLISPDLEGLITEMTSCDLVDDDEECGALSEGSETS 636
H ED+ + + DL G + + ++DD EE + E +++S
Sbjct: 874 HQEDDGHVNTTDLNGSAQKEITVSILDDSEELCSSEENNQSS 915
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Frame = +1
Query: 589 DDDEECGALSEGSETSEGGRA-----DTDDEGIERDSEPAPRR 702
D++EEC S EGG + DE E D P PR+
Sbjct: 39 DEEEECDEDLSASSAGEGGEGTDEEYEEGDEDEEEDETPRPRQ 81
>01_05_0716 +
24569177-24569462,24569818-24569938,24570033-24570082,
24570203-24570270,24570499-24570597,24570688-24570747,
24570863-24570922,24571075-24571129,24571217-24571266,
24571314-24571352
Length = 295
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -3
Query: 319 SGSIAPTDSTV-PRRAPRLWTS*TPPGSAGG*CSSKRSA*TPSRRSLRQYPCASSRSAGR 143
S S +PT S++ PR+A R G+ GG R+ T +RR PC+SS SA
Sbjct: 12 SPSPSPTPSSLHPRQALRFAV-----GTGGG--GRARATSTGTRRRAALVPCSSSVSARG 64
Query: 142 PAT 134
PA+
Sbjct: 65 PAS 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,348,051
Number of Sequences: 37544
Number of extensions: 498982
Number of successful extensions: 1976
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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