Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26k23
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1704 - 35481041-35481461,35481682-35481810,35482291-354823... 36 0.022
01_06_0160 - 27095727-27096008,27096164-27096652,27096983-270971... 32 0.47
10_05_0001 + 7702156-7702565,7702858-7702972,7704085-7704351,770... 31 0.62
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 0.82
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 29 3.3
01_01_0674 + 5162291-5162376,5162530-5162560,5162689-5163207,516... 29 3.3
11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851 29 4.4
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201... 29 4.4
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283... 29 4.4
12_02_0611 + 21118777-21119066,21119501-21119594,21119742-211201... 28 5.8
03_06_0730 + 35775439-35775726,35777113-35778345 28 5.8
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 5.8
01_01_0672 + 5147916-5147976,5148087-5148166,5148329-5148973,514... 28 5.8
>04_04_1704 - 35481041-35481461,35481682-35481810,35482291-35482397,
35482515-35482583,35482825-35482936,35483013-35483131,
35483211-35483291,35483629-35483700,35484039-35484239,
35484442-35484528,35485284-35485523,35485991-35486455,
35487434-35487556,35487643-35487769,35487851-35487919,
35488061-35488189,35488628-35488722,35488808-35488876,
35489332-35489443,35489545-35489663,35489753-35489833,
35490898-35490969,35491052-35491267,35491524-35491601,
35491694-35491831,35492403-35492414,35492639-35492872,
35493076-35493130,35493222-35493352,35493813-35494546,
35494613-35494820
Length = 1634
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Frame = +2
Query: 122 NDILNSDEVPTPWKDAVFNFEHSEYKIPKVDYLKEGKDYLKSLESKDNSAKEENAKFKTK 301
ND L+S P + S+Y Y + K+++ S ++++ E + K K
Sbjct: 823 NDGLDSSRRAMPMAKHYYKGASSDYVANGAAYAMKPKEFIARTYSPNSTSTESPEEIKAK 882
Query: 302 INEISNKAARKVKNTELSQKFDQVK---NDFDGKQ---NSFNDFVNNRGLTKAQVL 451
IN +S A V +L + D+++ N+ D K S + + +G T+A+ L
Sbjct: 883 INRLSQTLANTVLVAKLPDRGDKIRRQINELDEKLTVIESSPEPLERKGPTEARTL 938
>01_06_0160 -
27095727-27096008,27096164-27096652,27096983-27097132,
27097656-27097920,27097995-27098274,27100311-27100388,
27100597-27101240,27101334-27101412,27101489-27101612,
27101782-27101882,27102870-27103068
Length = 896
Score = 31.9 bits (69), Expect = 0.47
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +2
Query: 212 DYLKEGKDYLKS----LESKDNSAKEENAKFKTKINEISNKAARKVKNTELSQKFDQVKN 379
D +K G+ ++S + S DN+ + + F + +N+ NK+A T Q+F +++
Sbjct: 205 DIVKMGRPQVRSSSKPVASTDNAYSGQTSSFSSVVNQNPNKSASTAPPTTFEQRFPVLQD 264
Query: 380 DFDGKQNSFNDFVNNRGLTKAQVLIKTSERVGNRRT--NSAKSVPSRDSAILVDTTLLSY 553
+NS + +N ++ + G++ T +++ + S A L +TL++
Sbjct: 265 PIPQVKNSSHASADNHETQESDWFQQDGTLPGSQLTVPETSRDI-SLPVASLESSTLVA- 322
Query: 554 DDDVGFLTNS 583
DD NS
Sbjct: 323 -DDANSYNNS 331
>10_05_0001 +
7702156-7702565,7702858-7702972,7704085-7704351,
7704397-7704588
Length = 327
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 258 KTIVLKKKMPNLKQKSMKFPIRRPGKLRILNFLRNLIKSRMISMENKIVLTIL*IIGALQ 437
KT+ L K M N ++ +FP G+ RILNF L + I KI + + +Q
Sbjct: 110 KTVSLVKFMQNFLKRKQRFPGTVIGRCRILNFEEILSEQTKIKFSVKISCAMTTLTVGIQ 169
Query: 438 KLK 446
+ K
Sbjct: 170 QPK 172
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 31.1 bits (67), Expect = 0.82
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 197 KIPKVDYLKEGKDYLKSLESKDNSAKEENAKFKTKINEI-SNKAARKVKNTELSQKFDQV 373
KI +D L E L++L S N A+E+ ++ ++ ++ AR+ +N+EL + D +
Sbjct: 401 KISSIDLLNEE---LQALNSAKNEAEEKLSELTKDYTDLKASSEARESRNSELLLEKDNM 457
Query: 374 KNDFDGK 394
DGK
Sbjct: 458 IKQLDGK 464
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 197 KIPKVDYLKEGKDYLKSLESKDNSAKEENAKFKTKINEISNKAARKVK 340
K K L ++Y+KSLESK + +E+N + + ++ AA+ K
Sbjct: 316 KKDKTSILIRAREYVKSLESKLSELEEKNRELEARLASRPAAAAKNDK 363
>01_01_0674 +
5162291-5162376,5162530-5162560,5162689-5163207,
5165561-5166010,5166050-5166134,5167374-5167399
Length = 398
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 197 KIPKVDYLKEGKDYLKSLESKDNSAKEENAKFKTKINEISNKAARKVK-NTELSQKFDQV 373
K K L ++++KSLESK + +E+N + + ++ S AA+ K T ++ D+
Sbjct: 212 KKDKASILIRAREHIKSLESKLSELEEKNRELEARL--ASRPAAKNDKGETAAAEAGDET 269
Query: 374 KND 382
K +
Sbjct: 270 KRE 272
>11_04_0208 - 14871412-14872198,14872932-14873206,14873819-14873851
Length = 364
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 554 DDDVGFLTNSLRQTAKNSPRSRIYSKKPD 640
DDDVG + N + + SPR+ + KPD
Sbjct: 8 DDDVGSMLNWKSKCSTRSPRTTVAGAKPD 36
>07_03_1503 +
27017933-27018063,27019668-27019727,27019996-27020101,
27020254-27020325,27021008-27021061,27021707-27021856,
27022206-27022547,27022651-27024684,27024706-27024947,
27025658-27026235,27026329-27028183,27028533-27028851,
27028980-27029417
Length = 2126
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +2
Query: 17 RSQKSTPFPLDEVKPQEMDKKFTPPDYFGDLLIWHNDILNSDEVPTPWKDAVFNFEHSE- 193
R Q+ P+ L + + ++ K PPDY+ + L + V + +K+ V E +
Sbjct: 45 RQQQLAPYKL-KCDKEPLNNKLGPPDYYPQTPNCPEETLTKEYVQSGYKETVEGIEEARE 103
Query: 194 ---YKIP---KVDYLKEGKDYLKSLESKDNSAKEENAKFKTKINE 310
+IP K D + + K+ LK N ++ + K ++ N+
Sbjct: 104 IVLSQIPYFCKTDIVVKCKEALKKRLRAINDSRAQKRKALSQPNK 148
>06_01_0393 +
2831676-2831876,2831986-2832101,2832340-2832421,
2832515-2832671,2832755-2832848,2833942-2834008,
2834464-2835009
Length = 420
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 440 AQVLIKTSERVGNRRTNSAKSVPSRDSAILVDTTLLSYDD 559
A++L+KTSER+ R N+ P D +LV+ LS D
Sbjct: 203 AELLLKTSERLKQMRNNNFDMDP--DEVMLVEALWLSLQD 240
>12_02_0611 +
21118777-21119066,21119501-21119594,21119742-21120182,
21120267-21120866
Length = 474
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 275 EENAKFKTKIN-EISNKAARKVKNTELSQKFDQVKNDFDGKQNSFNDFV 418
E+ A+F+ + E N + +KV TE+S F + K D++ KQ S NDF+
Sbjct: 141 EKVAQFRGILTVEKGNGSVQKVA-TEMSHLFKEKKWDWNVKQISSNDFL 188
>03_06_0730 + 35775439-35775726,35777113-35778345
Length = 506
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 245 SLESKDNSAKEENAKFKTKINEISNKAARKVKNTELSQKFDQVKN 379
SL+S+ S + K++ INE + RK+ + S +F+ + N
Sbjct: 249 SLDSESASLDGQIVKYQPMINEAAKAMLRKILKLDSSHRFESMGN 293
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +2
Query: 191 EYKIPKVDYLKEGKDYLKSLESKDNSAKEE---NAKFKTKINEISNKAARKVKNTELSQK 361
E K + L++ +D +K+LES+ KEE + + +N+ +A KV N L+++
Sbjct: 1099 EEKDATLTQLEKSEDSIKNLESELAQLKEELSVQMESNSSLNKQLEEAILKVSN--LTEE 1156
Query: 362 FDQVKNDFDGKQNSFNDFVNNRGLTKAQVLIKTSE 466
+ V+ + K N N + L VL+ + +
Sbjct: 1157 LETVQAETASKINDME--TNTKDLVNTIVLLSSQK 1189
>01_01_0672 +
5147916-5147976,5148087-5148166,5148329-5148973,
5149111-5149341
Length = 338
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 197 KIPKVDYLKEGKDYLKSLESKDNSAKEENAKFKTKIN 307
K K L ++Y+KSLESK + +E+N + + +++
Sbjct: 262 KKDKTSILIRAREYVKSLESKLSELEEKNRELEARLS 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,952,984
Number of Sequences: 37544
Number of extensions: 310699
Number of successful extensions: 917
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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