Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26k23
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.65 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.65 
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   6.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.0  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   8.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 287 KFKTKINEISNKAARKVKNTELSQKFDQVKNDFDGKQNSFNDFV 418
           +F  KIN  S+K  + +    L   FD++K+D    Q  F  F+
Sbjct: 500 RFTYKININSDKETKGMMRIFLGPAFDEIKHDMVYLQKYFYLFM 543


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 287 KFKTKINEISNKAARKVKNTELSQKFDQVKNDFDGKQNSFNDFV 418
           +F  KIN  S+K  + +    L   FD++K+D    Q  F  F+
Sbjct: 500 RFTYKININSDKETKGMMRIFLGPAFDEIKHDMVYLQKYFYLFM 543


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 565 WLPDQQLEADRQEFTKKQNIFEETGR 642
           WL  Q+ E + Q  TKK  +  E  R
Sbjct: 43  WLIQQEREREHQRLTKKMILEYELRR 68


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 121 MPD*QIPKIVGRRKLFIHFLWFH 53
           +PD  IP  +GRR+ F  F+  H
Sbjct: 67  LPDLSIPMQLGRRQPFSLFIPAH 89


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +2

Query: 254 SKDNSAKEENAKFKTKINEISNKAARKVKNTELSQK 361
           SK    +EE     TKIN+I  +    V N E S K
Sbjct: 170 SKPLFEREEIKNVLTKINKIEEQDTVLVVNIEKSGK 205


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 554 DDDVGFLTNSLRQTAKNSP 610
           D ++GFL NS+  +   SP
Sbjct: 623 DSNMGFLNNSMCTSTTTSP 641


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,056
Number of Sequences: 438
Number of extensions: 3585
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)