Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26k11
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348...    31   0.66 
03_01_0266 - 2057354-2057638,2057762-2058022,2058342-2058778,205...    28   6.1  

>11_01_0450 -
           3487464-3487844,3487883-3488268,3488883-3489033,
           3489132-3491102,3492090-3492149,3492240-3492436,
           3492678-3492963
          Length = 1143

 Score = 31.5 bits (68), Expect = 0.66
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -1

Query: 305 KSVEQNLARLRRSVIAPRRTLAIQCGRSESHPTASAHITQLRENRCPPPL 156
           KS E++ +  RRS +   +TL I+ GRS+   T  ++  Q  EN+   P+
Sbjct: 264 KSGEKDTSNARRSKLKSVKTLRIETGRSKERITPLSYSYQKEENQNENPI 313


>03_01_0266 -
           2057354-2057638,2057762-2058022,2058342-2058778,
           2058889-2059213
          Length = 435

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = +2

Query: 278 VLPSFAQRTSEWLAALRYTLVLKQATARDVTTDLHTTNALAAVKSYIKIFVTRCAVKQLP 457
           VL   AQ    ++  LR    LK     DV+T +HT N    +   +  +    A  +LP
Sbjct: 132 VLEPLAQEVLPFVEKLRKHFPLKSLDVDDVSTHMHTENQDGELAQDVSCYEVEGANHELP 191

Query: 458 W 460
           +
Sbjct: 192 F 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,382,500
Number of Sequences: 37544
Number of extensions: 362719
Number of successful extensions: 967
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)