Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26k11
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL365440-4|CAH70559.1|  324|Homo sapiens olfactory receptor, fam...    34   0.55 
AB065640-1|BAC05866.1|  335|Homo sapiens seven transmembrane hel...    34   0.55 
AF399582-1|AAK95067.1|  216|Homo sapiens olfactory receptor prot...    33   0.73 
AF067800-1|AAF75560.1|  237|Homo sapiens HDCGC13P protein.             32   2.2  
DQ355152-1|ABC75877.1|  172|Homo sapiens R-spondin family member...    31   3.9  
AL050325-3|CAM28322.1|  172|Homo sapiens R-spondin family, membe...    31   3.9  
AL050325-2|CAB65783.4|  234|Homo sapiens R-spondin family, membe...    31   3.9  

>AL365440-4|CAH70559.1|  324|Homo sapiens olfactory receptor, family
           10, subfamily R, member 2 protein.
          Length = 324

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -2

Query: 505 GSVNDKSHAHTLFIYPRQLLDSATCHKYFYVTFNCGQCVSCM*IGRDVSRCCLFQ---HK 335
           G ++     +T  I P+ L++  +  +   ++FNC        +G  ++ C L     + 
Sbjct: 73  GILSTSETFYTFVILPKMLINLLSVART--ISFNCCALQMFFFLGFAITNCLLLGVMGYD 130

Query: 334 RISESCEPLRSPLSKTWQDCG 272
           R +  C PL  P   +WQ CG
Sbjct: 131 RYAAICHPLHYPTLMSWQVCG 151


>AB065640-1|BAC05866.1|  335|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 335

 Score = 33.9 bits (74), Expect = 0.55
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = -2

Query: 505 GSVNDKSHAHTLFIYPRQLLDSATCHKYFYVTFNCGQCVSCM*IGRDVSRCCLFQ---HK 335
           G ++     +T  I P+ L++  +  +   ++FNC        +G  ++ C L     + 
Sbjct: 84  GILSTSETFYTFVILPKMLINLLSVART--ISFNCCALQMFFFLGFAITNCLLLGVMGYD 141

Query: 334 RISESCEPLRSPLSKTWQDCG 272
           R +  C PL  P   +WQ CG
Sbjct: 142 RYAAICHPLHYPTLMSWQVCG 162


>AF399582-1|AAK95067.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 33.5 bits (73), Expect = 0.73
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = -2

Query: 478 HTLFIYPRQLLDSATCHKYFYVTFNCGQCVSCM*IGRDVSRCCLFQ---HKRISESCEPL 308
           +T  I P+ L++  +  +   ++FNC        +G  ++ C L     + R +  C PL
Sbjct: 6   YTFVILPKMLINLLSVART--ISFNCCALQMFFFLGFAITNCLLLGVMGYDRYAAICHPL 63

Query: 307 RSPLSKTWQDCG 272
             P   +WQ CG
Sbjct: 64  HYPTLMSWQVCG 75


>AF067800-1|AAF75560.1|  237|Homo sapiens HDCGC13P protein.
          Length = 237

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = -2

Query: 454 QLLDSATCHKYFYVTFNCGQCVSCM*IGRDVSRCCLFQHKRISESCEPLRSPLSKTWQDC 275
           QLL+  T  +  + T  C +    M +      CC    K  S +C  + S  S +WQDC
Sbjct: 74  QLLEKKTTKELVHTTLECVK--KNMPVEETAWSCCPKNWKSFSSNCYFI-STESASWQDC 130

Query: 274 GGRLSHLDARLL 239
               + ++A LL
Sbjct: 131 EKDCARMEAHLL 142


>DQ355152-1|ABC75877.1|  172|Homo sapiens R-spondin family member 4
           variant protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 17/81 (20%), Positives = 30/81 (37%)
 Frame = +1

Query: 187 CVICADAVGCDSLRPHCIASVRRGAITDLRSLAKFCSTDFGVARSSQIYACAETGNSARR 366
           C+IC++  GC + +      +RR  I         C   +   R  ++  C + G +   
Sbjct: 38  CIICSEENGCSTCQQRLFLFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCES 97

Query: 367 HDRSTYN*RTGRS*KLHKNIC 429
                +  R  R   L+K  C
Sbjct: 98  CFSQDFCIRCKRQFYLYKGKC 118


>AL050325-3|CAM28322.1|  172|Homo sapiens R-spondin family, member 4
           protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 17/81 (20%), Positives = 30/81 (37%)
 Frame = +1

Query: 187 CVICADAVGCDSLRPHCIASVRRGAITDLRSLAKFCSTDFGVARSSQIYACAETGNSARR 366
           C+IC++  GC + +      +RR  I         C   +   R  ++  C + G +   
Sbjct: 38  CIICSEENGCSTCQQRLFLFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCES 97

Query: 367 HDRSTYN*RTGRS*KLHKNIC 429
                +  R  R   L+K  C
Sbjct: 98  CFSQDFCIRCKRQFYLYKGKC 118


>AL050325-2|CAB65783.4|  234|Homo sapiens R-spondin family, member 4
           protein.
          Length = 234

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 17/81 (20%), Positives = 30/81 (37%)
 Frame = +1

Query: 187 CVICADAVGCDSLRPHCIASVRRGAITDLRSLAKFCSTDFGVARSSQIYACAETGNSARR 366
           C+IC++  GC + +      +RR  I         C   +   R  ++  C + G +   
Sbjct: 38  CIICSEENGCSTCQQRLFLFIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCES 97

Query: 367 HDRSTYN*RTGRS*KLHKNIC 429
                +  R  R   L+K  C
Sbjct: 98  CFSQDFCIRCKRQFYLYKGKC 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,577,152
Number of Sequences: 237096
Number of extensions: 1894764
Number of successful extensions: 4163
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)