Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26k11
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060422-1|AAL25461.1| 306|Drosophila melanogaster LD39243p pro... 31 2.0
AE014134-1248|AAF52493.1| 306|Drosophila melanogaster CG4502-PB... 31 2.0
AE014134-1247|AAF52492.1| 306|Drosophila melanogaster CG4502-PA... 31 2.0
AY069262-1|AAL39407.1| 643|Drosophila melanogaster GM05760p pro... 29 6.0
AE014297-4378|AAF56892.1| 643|Drosophila melanogaster CG2321-PA... 29 6.0
EF587234-1|ABQ85891.1| 981|Drosophila melanogaster MCPH1 isofor... 29 7.9
BT001806-1|AAN71561.1| 703|Drosophila melanogaster RH30075p pro... 29 7.9
AY122187-1|AAM52699.1| 826|Drosophila melanogaster LD43341p pro... 29 7.9
AE013599-1361|AAF58607.3| 779|Drosophila melanogaster CG8981-PA... 29 7.9
AE013599-1360|AAF58605.3| 826|Drosophila melanogaster CG8981-PB... 29 7.9
>AY060422-1|AAL25461.1| 306|Drosophila melanogaster LD39243p
protein.
Length = 306
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 567 MTSRSKEKVAAAFRKLFRSPDKLDN 641
M+SRSKE+V AFRK+F +N
Sbjct: 1 MSSRSKERVVTAFRKIFHKSSNNNN 25
>AE014134-1248|AAF52493.1| 306|Drosophila melanogaster CG4502-PB,
isoform B protein.
Length = 306
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 567 MTSRSKEKVAAAFRKLFRSPDKLDN 641
M+SRSKE+V AFRK+F +N
Sbjct: 1 MSSRSKERVVTAFRKIFHKSSNNNN 25
>AE014134-1247|AAF52492.1| 306|Drosophila melanogaster CG4502-PA,
isoform A protein.
Length = 306
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 567 MTSRSKEKVAAAFRKLFRSPDKLDN 641
M+SRSKE+V AFRK+F +N
Sbjct: 1 MSSRSKERVVTAFRKIFHKSSNNNN 25
>AY069262-1|AAL39407.1| 643|Drosophila melanogaster GM05760p
protein.
Length = 643
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 248 TLAIQCGRSESHPTASAHIT 189
T A++C RSES P A H+T
Sbjct: 162 TFAVKCERSESFPAARLHVT 181
>AE014297-4378|AAF56892.1| 643|Drosophila melanogaster CG2321-PA
protein.
Length = 643
Score = 29.1 bits (62), Expect = 6.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 248 TLAIQCGRSESHPTASAHIT 189
T A++C RSES P A H+T
Sbjct: 162 TFAVKCERSESFPAARLHVT 181
>EF587234-1|ABQ85891.1| 981|Drosophila melanogaster MCPH1 isoform A
protein.
Length = 981
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 314 ATPKSVEQNLARLRRSVIAPRRTLAIQCGRSESHPTASAHIT 189
ATP E + ARL++ + +P L ++ R+ PT SA+ T
Sbjct: 68 ATPTRQEGHWARLQQDLNSPNAALRLRAIRALKSPTKSAYNT 109
>BT001806-1|AAN71561.1| 703|Drosophila melanogaster RH30075p
protein.
Length = 703
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 672 WLESHSDRRLRYPVYPATETISGMQPPL 589
WL S+ D+R R+PV + T S + PL
Sbjct: 158 WLPSNGDKRKRFPVAKRSTTNSNPESPL 185
>AY122187-1|AAM52699.1| 826|Drosophila melanogaster LD43341p
protein.
Length = 826
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 314 ATPKSVEQNLARLRRSVIAPRRTLAIQCGRSESHPTASAHIT 189
ATP E + ARL++ + +P L ++ R+ PT SA+ T
Sbjct: 115 ATPTRQEGHWARLQQDLNSPNAALRLRAIRALKSPTKSAYNT 156
>AE013599-1361|AAF58607.3| 779|Drosophila melanogaster CG8981-PA,
isoform A protein.
Length = 779
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 314 ATPKSVEQNLARLRRSVIAPRRTLAIQCGRSESHPTASAHIT 189
ATP E + ARL++ + +P L ++ R+ PT SA+ T
Sbjct: 68 ATPTRQEGHWARLQQDLNSPNAALRLRAIRALKSPTKSAYNT 109
>AE013599-1360|AAF58605.3| 826|Drosophila melanogaster CG8981-PB,
isoform B protein.
Length = 826
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -1
Query: 314 ATPKSVEQNLARLRRSVIAPRRTLAIQCGRSESHPTASAHIT 189
ATP E + ARL++ + +P L ++ R+ PT SA+ T
Sbjct: 115 ATPTRQEGHWARLQQDLNSPNAALRLRAIRALKSPTKSAYNT 156
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,096,965
Number of Sequences: 53049
Number of extensions: 601956
Number of successful extensions: 1446
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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