Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26k09
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 47 1e-05
U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical pr... 38 0.008
AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical ... 38 0.008
AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormo... 38 0.008
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 34 0.077
U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical pr... 34 0.077
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 34 0.077
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 34 0.077
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 34 0.077
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 34 0.077
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 34 0.077
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 5.0
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 5.0
Z81041-1|CAB02786.2| 362|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical pr... 27 8.8
U58757-3|AAC47921.3| 620|Caenorhabditis elegans Hypothetical pr... 27 8.8
U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein. 27 8.8
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/99 (27%), Positives = 45/99 (45%)
Frame = +2
Query: 338 KRNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKD 517
K FQ DGAPAH +NV+ FP ++I WP SP L P+D+ +W ++
Sbjct: 302 KTKWTFQQDGAPAHKHKNVQAWCESNFP-DFIAFNQ---WPPSSPDLNPMDYSVWSVLEA 357
Query: 518 RASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRR 634
+A + +K ++ + + +R + RR
Sbjct: 358 KACSKPHRNIDSLKDSLKKAWDELDINYLRATVDSFPRR 396
>U23174-5|AAC46711.1| 329|Caenorhabditis elegans Hypothetical
protein R10H1.3 protein.
Length = 329
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 335 TKRNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVK 514
++++ FQ D A H + + R++ + + + WPARSP L P++ LW +
Sbjct: 222 SRKDFRFQQDNATIHVSNSTRDYFK-------LKKINLLDWPARSPDLNPIE-NLWGILV 273
Query: 515 D--RASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRR 634
A PTVA +KQ + + SI +++ +++ R
Sbjct: 274 RIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDR 315
>AF106576-3|AAK68401.1| 329|Caenorhabditis elegans Hypothetical
protein W07E6.6 protein.
Length = 329
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 335 TKRNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVK 514
++++ FQ D A H + + R++ + + + WPARSP L P++ LW +
Sbjct: 222 SRKDFRFQQDNATIHVSNSTRDYFK-------LKKINLLDWPARSPDLNPIE-NLWGILV 273
Query: 515 D--RASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRR 634
A PTVA +KQ + + SI +++ +++ R
Sbjct: 274 RIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDR 315
>AC006671-2|AAO21381.1| 459|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform b protein.
Length = 459
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Frame = +2
Query: 335 TKRNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVK 514
++++ FQ D A H + + R++ + + + WPARSP L P++ LW +
Sbjct: 352 SRKDFRFQQDNATIHVSNSTRDYFK-------LKKINLLDWPARSPDLNPIE-NLWGILV 403
Query: 515 D--RASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRR 634
A PTVA +KQ + + SI +++ +++ R
Sbjct: 404 RIVYAQNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDR 445
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 34.3 bits (75), Expect = 0.077
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R + + WP++SP L P++ LW+ ++ R
Sbjct: 170 RGFVFQQDNDPKHTSLHVRS----WFQRRHVHL---LDWPSQSPDLNPIE-HLWEELERR 221
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRRATLCI 649
++ + + +I +++ ++ RR I
Sbjct: 222 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 264
>U49941-9|AAB53871.1| 141|Caenorhabditis elegans Hypothetical
protein K10B3.2 protein.
Length = 141
Score = 34.3 bits (75), Expect = 0.077
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +2
Query: 350 VFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKD--RA 523
+F D A H + + R++ + + + WPARSP L P++ LW + A
Sbjct: 39 IFCQDNATIHVSNSTRDYFK-------LKKINLLDWPARSPDLNPIE-NLWGILVRIVYA 90
Query: 524 SFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRR 634
PTVA +KQ + + SI +++ +++ R
Sbjct: 91 QNKTYPTVASLKQGILDAWKSIPDNQLKSLVRSMEDR 127
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 34.3 bits (75), Expect = 0.077
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R R + WP++SP L P++ LW+ ++ R
Sbjct: 240 RGFVFQQDNDPKHTSLHVRS----WFQRR---RVHLLDWPSQSPDLNPIE-HLWEELERR 291
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRRATLCI 649
++ + + +I +++ ++ RR I
Sbjct: 292 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 334
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 34.3 bits (75), Expect = 0.077
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R + + WP++SP L P++ LW+ ++ R
Sbjct: 240 RGFVFQQDNDPKHTSLHVRS----WFQRRHVHL---LDWPSQSPDLNPIE-HLWEKLERR 291
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRRATLCI 649
++ + + +I +++ ++ RR I
Sbjct: 292 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 334
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 34.3 bits (75), Expect = 0.077
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R R + WP++SP L P++ LW+ ++ R
Sbjct: 170 RGFVFQQDNDPKHTSLHVRS----WFQRR---RVHLLDWPSQSPDLNPIE-HLWEELERR 221
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRRATLCI 649
++ + + +I +++ ++ RR I
Sbjct: 222 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 264
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 34.3 bits (75), Expect = 0.077
Identities = 25/103 (24%), Positives = 45/103 (43%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R R + WP++SP L P++ LW+ ++ R
Sbjct: 170 RGFVFQQDNDPKHTSLHVRS----WFQRR---RVHLLDWPSQSPDLNPIE-HLWEELERR 221
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRRATLCI 649
++ + + +I +++ ++ RR I
Sbjct: 222 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 264
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 34.3 bits (75), Expect = 0.077
Identities = 24/103 (23%), Positives = 45/103 (43%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R + + WP++SP L P++ LW+ ++ R
Sbjct: 240 RGFVFQQDNDPKHTSLHVRS----WFQRRHVHL---LDWPSQSPDLNPIE-HLWEELERR 291
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRRATLCI 649
++ + + +I +++ ++ RR I
Sbjct: 292 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRRCQAVI 334
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/98 (24%), Positives = 44/98 (44%)
Frame = +2
Query: 341 RNMVFQHDGAPAHFARNVREHLNVCFPREWIGRGGPVLWPARSPGLTPLDFFLWDYVKDR 520
R VFQ D P H + +VR F R R + WP++SP L P++ LW+ ++ R
Sbjct: 211 RGFVFQQDNDPKHTSLHVRS----WFQRR---RVHLLDWPSQSPDLNPIE-HLWEELERR 262
Query: 521 ASFFGCPTVAEMKQRVRSVFASITPTMVRNATQALSRR 634
++ + + +I +++ ++ RR
Sbjct: 263 LGGIRASNADAKFNQLENAWKAIPMSVIHKLIDSMPRR 300
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 54 DVIILKYWLKEM*SWKKNIVNFKSSNRYPTAVSVIFCKI 170
DVI L+ W + M W + IVN + + P + ++ CKI
Sbjct: 543 DVISLETWSRVMPRWLEAIVNDCTEDNQP-ELKILLCKI 580
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
protein E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 54 DVIILKYWLKEM*SWKKNIVNFKSSNRYPTAVSVIFCKI 170
DVI L+ W + M W + IVN + + P + ++ CKI
Sbjct: 543 DVISLETWSRVMPRWLEAIVNDCTEDNQP-ELKILLCKI 580
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 54 DVIILKYWLKEM*SWKKNIVNFKSSNRYPTAVSVIFCKI 170
DVI L+ W + M W + IVN + + P + ++ CKI
Sbjct: 536 DVISLETWSRVMPRWLEAIVNDCTEDNQP-ELKILLCKI 573
>Z81041-1|CAB02786.2| 362|Caenorhabditis elegans Hypothetical
protein C27A7.2 protein.
Length = 362
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 127 EDLKLTIFFFQLYISLSQYLSIIT 56
ED+K+ + FFQ+ IS+SQ S T
Sbjct: 339 EDVKILVNFFQILISISQLYSNAT 362
>Z70312-5|CAA94384.1| 361|Caenorhabditis elegans Hypothetical
protein ZC168.4 protein.
Length = 361
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 468 ERAGHSTGPPRPIHSRGKQTLRCSRTLRA 382
+ A H GP +P++++G QT R +R + A
Sbjct: 20 QMAKHGNGPLKPVNAQGLQTKREAREILA 48
>U58757-3|AAC47921.3| 620|Caenorhabditis elegans Hypothetical
protein C01B10.10 protein.
Length = 620
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 63 ILKYWLKEM*SWKKNIVNFKSSNR 134
I YWLKEM + +NI K + R
Sbjct: 494 ITNYWLKEMMEYDRNITKAKKNQR 517
>U20903-1|AAA84394.1| 361|Caenorhabditis elegans cyclin B protein.
Length = 361
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 468 ERAGHSTGPPRPIHSRGKQTLRCSRTLRA 382
+ A H GP +P++++G QT R +R + A
Sbjct: 20 QMAKHGNGPLKPVNAQGLQTKREAREILA 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,926,754
Number of Sequences: 27780
Number of extensions: 350695
Number of successful extensions: 893
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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