Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26k03
         (334 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49830-14|AAK31479.1|  182|Caenorhabditis elegans Hypothetical p...    30   0.46 
U23170-2|ABD63218.1|  150|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z83105-1|CAB05480.1|  335|Caenorhabditis elegans Hypothetical pr...    27   2.5  
Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical pr...    26   7.5  
AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical...    26   7.5  
Z81142-7|CAB03509.2|  481|Caenorhabditis elegans Hypothetical pr...    25   10.0 
Z81047-9|CAB02835.2|  339|Caenorhabditis elegans Hypothetical pr...    25   10.0 
U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of a...    25   10.0 
AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.      25   10.0 

>U49830-14|AAK31479.1|  182|Caenorhabditis elegans Hypothetical
           protein C33F10.11 protein.
          Length = 182

 Score = 29.9 bits (64), Expect = 0.46
 Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = -1

Query: 232 FLFFLPFI--STILSIALEPRFHSSLASNPI 146
           FL F+PF+  S IL IAL   F+++LASN I
Sbjct: 9   FLVFIPFLTLSVILLIALLAVFNTTLASNSI 39


>U23170-2|ABD63218.1|  150|Caenorhabditis elegans Hypothetical
           protein F58F12.4 protein.
          Length = 150

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -1

Query: 292 AKIIYYTDC---SLVACNGMLHWFLFFLPFISTILSIAL 185
           +K +YYT C   ++  C  +  W L FL  I   LSI L
Sbjct: 88  SKWVYYTCCGGANMYCCEHIQTWLLSFLAVIIVFLSIFL 126


>Z83105-1|CAB05480.1|  335|Caenorhabditis elegans Hypothetical
           protein F14H3.1 protein.
          Length = 335

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 241 LHWFLFFLPFISTILSIALEPRFHSSLASNPITVL 137
           +HW  ++LP +  +LS  L P F   + +  IT L
Sbjct: 3   IHWTHYYLPKVFGVLSFILNPFFIWLILNENITAL 37


>Z74026-2|CAD54122.1|  588|Caenorhabditis elegans Hypothetical
           protein B0240.4 protein.
          Length = 588

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -1

Query: 235 WFLFFLPFISTILSIALEPRFHSSLASNPITVLLE*MKSIAFP 107
           W L  +PF   +  +    +F+S ++   +  ++  MK I+FP
Sbjct: 273 WLLLNIPFHVVLFGLCFTQQFYSKISMKIVNQIV--MKPISFP 313


>AL132904-24|CAC35834.2|  459|Caenorhabditis elegans Hypothetical
           protein Y111B2A.4 protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 102 LVGKAMDFIYSNKTVMGLLARELWNLGSSAIDRIVEMK 215
           +V +  D I   KT M  L    WN  +S ID+I E+K
Sbjct: 93  MVKQRDDEIKKLKTQMEQLQESGWNESTSDIDQICELK 130


>Z81142-7|CAB03509.2|  481|Caenorhabditis elegans Hypothetical
           protein ZK1037.10 protein.
          Length = 481

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 98  CFGWEGNGFHL 130
           CFGW+  G+HL
Sbjct: 51  CFGWDPKGYHL 61


>Z81047-9|CAB02835.2|  339|Caenorhabditis elegans Hypothetical
           protein C41G6.11 protein.
          Length = 339

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = -3

Query: 275 HGLLSCRMQWNASLVFIFSAFHLNNPIDSARTKIPXXXXXXXXXXFIGVDEIHCLPNQNI 96
           +G+LS    W++ L+ +  AF L+  I++    I            +G+ ++  +P+   
Sbjct: 100 YGILSRWYSWSSHLLMMMVAFFLSCQIETLMLCI-----LQKHKTILGLRKLSNIPDWPY 154

Query: 95  RSCVFIVL*LLNFSVQF 45
            +CVF+VL    F V F
Sbjct: 155 -NCVFVVLGFYPFLVTF 170


>U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 5 protein.
          Length = 700

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 9   IISPMNSFKSPKELNREIQKLENNKYTTSDVLVGKAMDFIYSNKTV 146
           I+S + +  SP+ +  +I  +++  YT+S   V  A+  I S K V
Sbjct: 635 IVSKLRNDMSPRHVPNKIYAVDDIPYTSSGKKVEVAVKQIVSGKAV 680


>AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.
          Length = 700

 Score = 25.4 bits (53), Expect = 10.0
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 9   IISPMNSFKSPKELNREIQKLENNKYTTSDVLVGKAMDFIYSNKTV 146
           I+S + +  SP+ +  +I  +++  YT+S   V  A+  I S K V
Sbjct: 635 IVSKLRNDMSPRHVPNKIYAVDDIPYTSSGKKVEVAVKQIVSGKAV 680


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,390,775
Number of Sequences: 27780
Number of extensions: 107874
Number of successful extensions: 293
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)