Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26k02
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.2  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 2   IFIVGHRTLLIRAKQIYDGLKSY 70
           +FI  HR +  R   I+ G+++Y
Sbjct: 84  LFIPAHRKIAARLIDIFMGMRTY 106


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 98  TDAVHRAVYLSIAPINTNQSF 160
           T+A H A+Y ++AP  T   F
Sbjct: 768 TEAEHYALYTAMAPHATASEF 788


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 598 QLLKRLPIEPVLQAIEHRDATTI 530
           QL+KR PI  ++  ++H   T +
Sbjct: 140 QLIKRHPIVTIMGHVDHGKTTLL 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,171
Number of Sequences: 438
Number of extensions: 3438
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)