Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26j23
(419 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL442128-2|CAH73039.1| 420|Homo sapiens ankyrin repeat domain 1... 32 0.90
AL157875-2|CAH70238.1| 420|Homo sapiens ankyrin repeat domain 1... 32 0.90
AK026017-1|BAB15323.1| 169|Homo sapiens protein ( Homo sapiens ... 32 0.90
AK000111-1|BAA90951.1| 157|Homo sapiens protein ( Homo sapiens ... 32 0.90
AK000100-1|BAA90945.1| 420|Homo sapiens protein ( Homo sapiens ... 32 0.90
AK024455-1|BAB15745.1| 81|Homo sapiens FLJ00047 protein protein. 30 2.7
AL021578-6|CAI21080.1| 516|Homo sapiens recombining binding pro... 29 8.4
AL021578-5|CAI21079.1| 517|Homo sapiens recombining binding pro... 29 8.4
AB027710-1|BAA87051.1| 516|Homo sapiens transcription factor RB... 29 8.4
AB026048-1|BAA86121.1| 520|Homo sapiens RBP-L protein. 29 8.4
AB024964-1|BAA88232.1| 520|Homo sapiens transcription factor RB... 29 8.4
>AL442128-2|CAH73039.1| 420|Homo sapiens ankyrin repeat domain 10
protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 80 TTPVSTTAGPLVTFKVHQLNVCVCGTNQPMKTIHTIPYEVFSLHL 214
T +S+ P F Q ++C+ GT +P KT+ P SLHL
Sbjct: 306 TNGISSGLAPGQPFPSSQGSLCISGTEEPEKTLRANPELCGSLHL 350
>AL157875-2|CAH70238.1| 420|Homo sapiens ankyrin repeat domain 10
protein.
Length = 420
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 80 TTPVSTTAGPLVTFKVHQLNVCVCGTNQPMKTIHTIPYEVFSLHL 214
T +S+ P F Q ++C+ GT +P KT+ P SLHL
Sbjct: 306 TNGISSGLAPGQPFPSSQGSLCISGTEEPEKTLRANPELCGSLHL 350
>AK026017-1|BAB15323.1| 169|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22364 fis, clone HRC06575. ).
Length = 169
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 80 TTPVSTTAGPLVTFKVHQLNVCVCGTNQPMKTIHTIPYEVFSLHL 214
T +S+ P F Q ++C+ GT +P KT+ P SLHL
Sbjct: 55 TNGISSGLAPGQPFPSSQGSLCISGTEEPEKTLRANPELCGSLHL 99
>AK000111-1|BAA90951.1| 157|Homo sapiens protein ( Homo sapiens
cDNA FLJ20104 fis, clone COL04806. ).
Length = 157
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 80 TTPVSTTAGPLVTFKVHQLNVCVCGTNQPMKTIHTIPYEVFSLHL 214
T +S+ P F Q ++C+ GT +P KT+ P SLHL
Sbjct: 43 TNGISSGLAPGQPFPSSQGSLCISGTEEPEKTLRANPELCGSLHL 87
>AK000100-1|BAA90945.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ20093 fis, clone COL04263. ).
Length = 420
Score = 31.9 bits (69), Expect = 0.90
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 80 TTPVSTTAGPLVTFKVHQLNVCVCGTNQPMKTIHTIPYEVFSLHL 214
T +S+ P F Q ++C+ GT +P KT+ P SLHL
Sbjct: 306 TNGISSGLAPGQPFPSSQGSLCISGTEEPEKTLRANPELCGSLHL 350
>AK024455-1|BAB15745.1| 81|Homo sapiens FLJ00047 protein protein.
Length = 81
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 419 FFFSQLINFFILYTFFCSLKGIVTVGPHLE 330
FFF L FF+ FC L+ +T+ P LE
Sbjct: 27 FFFFGLFFFFLFVCLFCFLRWSLTLSPRLE 56
>AL021578-6|CAI21080.1| 516|Homo sapiens recombining binding
protein suppressor of hairless (Drosophila)-like
protein.
Length = 516
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 345 WAALRAPMTLPMSVTHSDHL 286
W LRAP+T+PMS+ +D L
Sbjct: 445 WRWLRAPITIPMSLVRADGL 464
>AL021578-5|CAI21079.1| 517|Homo sapiens recombining binding
protein suppressor of hairless (Drosophila)-like
protein.
Length = 517
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 345 WAALRAPMTLPMSVTHSDHL 286
W LRAP+T+PMS+ +D L
Sbjct: 446 WRWLRAPITIPMSLVRADGL 465
>AB027710-1|BAA87051.1| 516|Homo sapiens transcription factor RBP-L
protein.
Length = 516
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 345 WAALRAPMTLPMSVTHSDHL 286
W LRAP+T+PMS+ +D L
Sbjct: 445 WRWLRAPITIPMSLVRADGL 464
>AB026048-1|BAA86121.1| 520|Homo sapiens RBP-L protein.
Length = 520
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 345 WAALRAPMTLPMSVTHSDHL 286
W LRAP+T+PMS+ +D L
Sbjct: 449 WRWLRAPITIPMSLVRADGL 468
>AB024964-1|BAA88232.1| 520|Homo sapiens transcription factor RBP-L
protein.
Length = 520
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 345 WAALRAPMTLPMSVTHSDHL 286
W LRAP+T+PMS+ +D L
Sbjct: 449 WRWLRAPITIPMSLVRADGL 468
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,339,276
Number of Sequences: 237096
Number of extensions: 1029764
Number of successful extensions: 1426
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1426
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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