Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26j23
         (419 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical pr...    29   1.0  
U49956-1|AAO38615.1|  669|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical...    27   5.5  
Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z66496-5|CAA91280.2|  507|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical...    27   7.2  
Z78542-9|CAB01742.2|  405|Caenorhabditis elegans Hypothetical pr...    26   9.5  
U39646-2|AAA80368.2|  223|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>Z81076-9|CAB03057.1|  372|Caenorhabditis elegans Hypothetical
           protein F35C5.8 protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = +1

Query: 31  FCDYKSIK*NH--NSVQSYNSSFDYCGTTSYF*SSSAKCLCLRYEPADENYPYNTL--RG 198
           FC+   ++ N+  N++Q+   +  Y  TT Y     AK  C +Y P  ++Y  N L  + 
Sbjct: 219 FCEQGWVQYNYPWNNLQNRYGTCLYTDTTDYSSRDGAKSKCRQYSP--KSYLVNELDQQK 276

Query: 199 FQFTFTRVEGSMKKENNTYDN 261
             F F  V     K  N + N
Sbjct: 277 RDFNFNLVNSDSTKPVNAFYN 297


>U49956-1|AAO38615.1|  669|Caenorhabditis elegans Hypothetical
           protein M03A1.3 protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 290 WSLWVTDIGNVMGALSAAQP*RSLL 364
           W+ W TD G +   L+ +QP  SLL
Sbjct: 516 WTQWHTDFGTISTILAFSQPLNSLL 540


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
           protein C16A3.7 protein.
          Length = 1119

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 316 QCHGSSKCGPTVTIPFKLQKNVYRIKKLINC 408
           +CHG   C P   +  K+    +R++K I C
Sbjct: 656 KCHGEQNCPPCTQLTEKMCYGGHRVRKNIPC 686


>AC006684-10|AAF39962.2|  665|Caenorhabditis elegans Hypothetical
           protein T02H6.2 protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 199 NLVRYCMDSFHRLVRTADTN 140
           N++R+C D   RL RTA+T+
Sbjct: 120 NILRFCNDLLRRLSRTAETS 139


>Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical
           protein F11A5.9 protein.
          Length = 537

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 290 WSLWVTDIGNVMG 328
           WS+W++ IGN MG
Sbjct: 310 WSIWISAIGNFMG 322


>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 40  YKSIK*NHNSVQSYNSSFDYCGTTS 114
           YK  K N N+ QS++S    CG T+
Sbjct: 799 YKGFKGNQNNFQSFDSCSRACGATN 823


>Z66496-5|CAA91280.2|  507|Caenorhabditis elegans Hypothetical
           protein E04D5.3 protein.
          Length = 507

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 87  GVVTLYTIMILFYTFIITKFAKAYK 13
           GVV   T++I F++  ITK  +AY+
Sbjct: 102 GVVISATVIISFHSIFITKIDRAYR 126


>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
           protein B0511.12 protein.
          Length = 1634

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 84  VVTLYTIMILFYTFIITKF 28
           +VTLY   I++YTF  TKF
Sbjct: 912 LVTLYIKCIIYYTFTSTKF 930


>Z78542-9|CAB01742.2|  405|Caenorhabditis elegans Hypothetical
           protein F20D1.8 protein.
          Length = 405

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 87  GVVTLYTIMILFYTFIITKFAKAYK 13
           G++   TI+I F+   ITK  K+YK
Sbjct: 95  GIMMTATIIISFHPMFITKIDKSYK 119


>U39646-2|AAA80368.2|  223|Caenorhabditis elegans Hypothetical
           protein F47B7.4 protein.
          Length = 223

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 145 CLRYEPADENYPYNTLRGFQFTFTRVEGSMKKENNTYDNSDQSLA 279
           C+R  P D+ Y  +TL   Q T    E +M  E +T    D ++A
Sbjct: 20  CMRMVPPDDVYIPSTLAPEQSTLVPGEITMAPEESTMAPEDTTMA 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,218,271
Number of Sequences: 27780
Number of extensions: 175197
Number of successful extensions: 470
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)