Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26j20
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 89 1e-17
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 89 1e-17
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 65 3e-10
BC132822-1|AAI32823.1| 622|Homo sapiens hypothetical protein FL... 31 4.2
BC035159-1|AAH35159.1| 622|Homo sapiens hypothetical protein FL... 31 4.2
AK093167-1|BAC04083.1| 604|Homo sapiens protein ( Homo sapiens ... 31 4.2
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 89.0 bits (211), Expect = 1e-17
Identities = 42/54 (77%), Positives = 46/54 (85%)
Frame = +2
Query: 32 MSSKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
MSSKVSRDTLYE V VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 54
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 54 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 85
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 64.9 bits (151), Expect = 3e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +2
Query: 77 AVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVK 193
+VL ++ K+R FLETVELQI LKNYDPQKDKRFSGTV+
Sbjct: 5 SVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVR 43
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = +2
Query: 536 RLKYIPRPKMQVCVLGDQQHCDEAKTLNVPCM 631
RLK PRPK VCVLGDQQHCDEAK +++P M
Sbjct: 43 RLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHM 74
>BC132822-1|AAI32823.1| 622|Homo sapiens hypothetical protein
FLJ35848 protein.
Length = 622
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 491 SKYLKCSQYLVSSISTDNTCILNHHLWFSVSLKNE*SIPHRVASHLIQNN 342
S+Y K L +S ++ LN W +V KN IP+R +L++ N
Sbjct: 249 SEYFKSVNLLSNSATSSGGINLNRPTWMNVQTKNNTPIPYRNQGNLMKLN 298
>BC035159-1|AAH35159.1| 622|Homo sapiens hypothetical protein
FLJ35848 protein.
Length = 622
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 491 SKYLKCSQYLVSSISTDNTCILNHHLWFSVSLKNE*SIPHRVASHLIQNN 342
S+Y K L +S ++ LN W +V KN IP+R +L++ N
Sbjct: 249 SEYFKSVNLLSNSATSSGGINLNRPTWMNVQTKNNTPIPYRNQGNLMKLN 298
>AK093167-1|BAC04083.1| 604|Homo sapiens protein ( Homo sapiens
cDNA FLJ35848 fis, clone TESTI2006894. ).
Length = 604
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 491 SKYLKCSQYLVSSISTDNTCILNHHLWFSVSLKNE*SIPHRVASHLIQNN 342
S+Y K L +S ++ LN W +V KN IP+R +L++ N
Sbjct: 286 SEYFKSVNLLSNSATSSGGINLNRPTWMNVQTKNNTPIPYRNQGNLMKLN 335
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,048,550
Number of Sequences: 237096
Number of extensions: 2116177
Number of successful extensions: 6873
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6873
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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