Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26j14
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0034 - 12539201-12540439 37 0.010
12_01_0914 + 8901915-8902574 34 0.096
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 32 0.39
11_06_0577 - 25158833-25162864 31 0.68
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 30 1.2
05_01_0266 - 2040555-2040722,2041248-2041349,2041461-2041958,204... 30 1.6
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 29 2.1
11_04_0441 + 17781533-17781775,17782007-17782114,17782386-177824... 29 2.1
12_02_0318 - 17457182-17462232,17462745-17462955,17463356-174634... 29 2.7
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 29 2.7
04_04_1390 - 33184233-33184478,33184601-33184705,33184783-331848... 29 3.6
09_02_0212 + 5820866-5821031,5821172-5821224,5821512-5821639,582... 28 6.3
01_07_0229 + 42161770-42164562 27 8.3
>12_02_0034 - 12539201-12540439
Length = 412
Score = 37.1 bits (82), Expect = 0.010
Identities = 32/138 (23%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = +1
Query: 145 IFSYIEEKYLHYVINLETIIEIFEKLDFMYDFNIQGQDIKHVMNFFEMQYSGNIL---ED 315
+F+ + ++ V NLET EI+ KL +++ + +D+K ++F ++QY + E
Sbjct: 70 LFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDVK--LHFLKIQYETFTMLPHES 127
Query: 316 IN----KLQNIQFEITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELT 483
+N +L I ++ ++ K+L PEK+ T ++ N D+ + L
Sbjct: 128 VNDMYGRLNVIGNDLKGLGATYTDLEVAQKMLRAPPEKYETLVTMLINSDMSRMTPASLL 187
Query: 484 RRIK-NELEFIKEDSIIE 534
+I N++ +K+ + E
Sbjct: 188 GKINTNDIYKLKKKEMEE 205
>12_01_0914 + 8901915-8902574
Length = 219
Score = 33.9 bits (74), Expect = 0.096
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 187 NLETIIEIFEKLDFMYDFNIQGQDIKHVMNFFEMQYSGNIL---EDIN----KLQNIQFE 345
NLET EI+ KL +++ + +D K ++F ++QY + E +N +L I +
Sbjct: 3 NLETAYEIWNKLVEIHEGTSEYKDAK--LHFLKIQYETFSMLPHESVNDMYGRLNIIIND 60
Query: 346 ITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIK-NELEFIKED 522
+ ++ KIL LP+K T +I N D+ + L +I N++ +K+
Sbjct: 61 LKGLGATYTDLEVAQKILRALPDKHETLVTILINSDMSRMTPTSLLGKINTNDMYKLKKK 120
Query: 523 SIIES 537
+ E+
Sbjct: 121 EMEEA 125
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 412 EKFNTFKSIWNNIDVEKKNLDELTRRIKNELEFIKEDSIIESREILKGNE 561
+K N+ +WN ID+ N +++T I++E+ F+ E + E+ N+
Sbjct: 410 DKINSMIEVWNKIDIVDNNDNDVTDDIEDEI-FLTEGEEDKEEELFSEND 458
>11_06_0577 - 25158833-25162864
Length = 1343
Score = 31.1 bits (67), Expect = 0.68
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 412 EKFNTFKSIWNNIDVEKKNLDELTRRIKNELEFIKEDSII-ESREILKGNEK 564
EK+ F +W ++EK+N D+ ++K +++ IK+ E + ++ EK
Sbjct: 332 EKWQVFDEMWE--EIEKRNFDDRIEQLKTKIDSIKDKKTTNEIEKTVRSQEK 381
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +1
Query: 229 MYDFNIQGQDIKHVMNFFEMQYSGNILEDINKLQN--IQFEITSKENKISEQTFMHKILN 402
MY +Q +D MN E SG LE ++ +N + + N I + M + +N
Sbjct: 1108 MYADKVQ-RDASRGMNVEE---SGASLEGVDGGKNDVANWGVKEGNNLILQVETMEEEIN 1163
Query: 403 LLPEKFNTFKSIWNNIDVEKKNLDELTRRIKNE-LEFIKEDSIIESREILKGNEK 564
+ EKF+ K + + E ++E K+ L K+++ +E + + G+ K
Sbjct: 1164 FMSEKFSDPKKFYTRFEKENDKIEEQEENDKSSTLNDKKDENTLEHTDSVGGDVK 1218
>05_01_0266 -
2040555-2040722,2041248-2041349,2041461-2041958,
2042372-2042479,2042559-2042753
Length = 356
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +1
Query: 304 ILEDIN--KLQNIQFEITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDE 477
IL D++ + N+ + +K+ +I+ +IL+ N K + + ++ +K+ E
Sbjct: 220 ILSDVSPRNIDNLNKLLNAKDAEIARLRDEIRILSA--HWTNKTKELESQLEKQKRTDQE 277
Query: 478 LTRRIKNELEFIKEDSIIESREILKGNEKR 567
L +RI +LEF ++S + R++ + EKR
Sbjct: 278 LKKRIL-KLEFCLQESRSQIRKLQRAGEKR 306
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 322 KLQNIQFEITSKENKISEQTFMH-KILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIKN 498
KL EI+S + KI + + + + + + K + + E+ +L L +K
Sbjct: 344 KLDETNLEISSMQKKIEDARAQDLESIATVSTELDDAKEMLQKVAEEESSLRSLVESLKQ 403
Query: 499 ELEFIKED 522
ELE +KE+
Sbjct: 404 ELEAVKEE 411
>11_04_0441 +
17781533-17781775,17782007-17782114,17782386-17782471,
17782546-17782807,17782921-17783120,17783770-17784012,
17784118-17784394,17784625-17784759,17784880-17784960,
17785311-17785406,17785661-17785756,17785834-17785890,
17785967-17786035,17786154-17786240,17786534-17786635,
17786730-17786819,17786900-17786980,17787573-17787653,
17787761-17787856,17787937-17787993,17788093-17788137,
17788218-17788346
Length = 906
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 313 DINKLQNIQFEITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNI-DVEKKNLDELTRR 489
D+N+ + ++ EI KI + F++K L+P+KF I ++ K +L E+TR
Sbjct: 278 DMNEEELLENEIRKWLKKIRQTGFLYKETMLVPDKFCHISFTEEKIEELGKDHLFEVTRE 337
Query: 490 I 492
I
Sbjct: 338 I 338
>12_02_0318 - 17457182-17462232,17462745-17462955,17463356-17463403,
17466161-17466346
Length = 1831
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 10/74 (13%)
Frame = +1
Query: 265 HVMNFFEMQYSGNILEDINKLQNIQFEITSKENKISEQTFMHKIL----------NLLPE 414
H++N+ + S L +N +QF EN ++ F+ KI N LP
Sbjct: 998 HIVNYLMSKSSNGALSRVNMFAMLQFIRNLTENNLTSVNFIEKIKKGCQFKTCLGNRLPV 1057
Query: 415 KFNTFKSIWNNIDV 456
F S W N V
Sbjct: 1058 NSILFNSEWENASV 1071
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/80 (21%), Positives = 40/80 (50%)
Frame = +1
Query: 319 NKLQNIQFEITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIKN 498
N+L + ++TS+ +++++ K+L ++ + K ++I EK+ + T ++
Sbjct: 961 NELHKVNEQVTSQASQLADALSSLKVLE---DELSNSKEYISSISEEKRQMQLHTAAVEE 1017
Query: 499 ELEFIKEDSIIESREILKGN 558
ELE E+ I + + N
Sbjct: 1018 ELEKTNEELAIYASKFEDAN 1037
>04_04_1390 -
33184233-33184478,33184601-33184705,33184783-33184890,
33184967-33185101,33185263-33185363,33185495-33185564,
33185642-33185758,33186001-33186138,33186371-33186439,
33186556-33186645,33186758-33186940,33187020-33187052
Length = 464
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -2
Query: 584 LLQMKHLFSFPFKISRDSMIESSLM 510
L ++KH F+ P +I+RDS+ ES +M
Sbjct: 295 LAKLKHGFNDPIEIARDSVPESDMM 319
>09_02_0212 +
5820866-5821031,5821172-5821224,5821512-5821639,
5821728-5821833,5821998-5822132,5822211-5822262,
5822383-5822447,5823984-5824090,5824596-5824792,
5825145-5825260,5825368-5825453,5825525-5825597,
5826886-5826977,5827069-5827207,5827275-5827369,
5827804-5827978,5828345-5828491
Length = 643
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 55 RKLIKLLLDTKGIKIDDKNEEKLENKGKFII-FSYIEEKYLHYVINLETIIEIFEKLDFM 231
++L+++ + K DD + L G++ + I+E + V + ++FE F+
Sbjct: 355 QQLVRIHQLFRQAKFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFI 414
Query: 232 YD--FNIQGQDIKHVMNFF 282
+ +I G+D+KH +N F
Sbjct: 415 VEAGISIGGKDVKHGLNIF 433
>01_07_0229 + 42161770-42164562
Length = 930
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +1
Query: 142 IIFSYIEEKYLHYVINLETIIEIFEKLDFMYDFNIQGQDIKH 267
+ SY+++ +H + N+ I+ +L YD+ +Q + IK+
Sbjct: 334 LALSYLKKSRIHEIPNMGNTSHIYTRLKLSYDY-LQDKQIKY 374
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,470,151
Number of Sequences: 37544
Number of extensions: 198587
Number of successful extensions: 627
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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