Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26j14
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical... 33 0.20
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.80
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 31 0.80
AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical ... 31 0.80
Z81453-7|CAB03797.2| 457|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF264764-1|AAQ14296.1| 457|Caenorhabditis elegans sterol reduct... 30 1.1
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 30 1.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 30 1.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 30 1.4
Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF099917-1|AAC68784.2| 188|Caenorhabditis elegans Hypothetical ... 29 1.8
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 29 2.4
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 29 2.4
Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF036692-4|AAS47682.1| 318|Caenorhabditis elegans Serpentine re... 29 3.2
AC006648-3|AAF39855.1| 216|Caenorhabditis elegans Hypothetical ... 28 4.2
Z81117-14|CAB03313.3| 272|Caenorhabditis elegans Hypothetical p... 28 5.6
Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 28 5.6
AC084159-11|ABO16465.1| 449|Caenorhabditis elegans F-box a prot... 28 5.6
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 27 7.4
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 27 7.4
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 9.8
U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical pr... 27 9.8
U41533-1|AAA83162.2| 357|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical... 27 9.8
AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical ... 27 9.8
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 27 9.8
>AL031627-22|CAI79188.1| 213|Caenorhabditis elegans Hypothetical
protein Y102A5C.36 protein.
Length = 213
Score = 32.7 bits (71), Expect = 0.20
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = -2
Query: 494 LILRVNSSKFFFSTSILFQIDLKVLNFSGNKFKILCINVCSEILF-SLLVIS-NCIFCNL 321
L+L + + FF + F I + ++ F+G K C++ I F + L S NC+ +
Sbjct: 11 LLLGLKNLCFFVFPFVSFIILMFLVFFTGKK----CLSAFKLIYFYNFLYFSPNCVE-TI 65
Query: 320 FISSNMFPEYCISKKFITCFISCPCILKSYIKSNFSKIS 204
F+S C+ +++I CF L Y+ S S +S
Sbjct: 66 FVSLGRNLFLCLQRRYIHCFFHFLLKLTLYLSSEISHVS 104
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -2
Query: 539 RDSMIESSLMNSNSFLILRVNSS-KFFFSTSILFQIDLKVLNF-SGNKFKILCINVCSEI 366
RD++ ++ +L+ R+N S F ST+ + +D+ F + N F+ CIN C+E
Sbjct: 446 RDALSKAIYSKLFDWLVSRINDSIPFEKSTNFVGVLDVAGFEFYAKNSFEQFCINFCNEK 505
Query: 365 L 363
L
Sbjct: 506 L 506
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -2
Query: 539 RDSMIESSLMNSNSFLILRVNSS-KFFFSTSILFQIDLKVLNF-SGNKFKILCINVCSEI 366
RD++ ++ +L+ R+N S F ST+ + +D+ F + N F+ CIN C+E
Sbjct: 446 RDALSKAIYSKLFDWLVSRINDSIPFEKSTNFVGVLDVAGFEFYAKNSFEQFCINFCNEK 505
Query: 365 L 363
L
Sbjct: 506 L 506
>AF098996-4|AAC68705.1| 888|Caenorhabditis elegans Hypothetical
protein T11F1.8 protein.
Length = 888
Score = 30.7 bits (66), Expect = 0.80
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = -2
Query: 578 QMKHLFSFPFKISRDSMIESSLMNSNSFLILRVNSSKFFFSTSILFQIDLKVLNFSGNKF 399
Q+K +F +K+ ++E+S + S SF+ L N ++ F+ + + ++N S
Sbjct: 72 QLKVVFQETYKLVGGLIVENSSLESLSFIALSKNRAE--FNLECMANYGISIINNS---- 125
Query: 398 KILCINVCSEILFSLLVISNCIF 330
K+ I++ + F ++ + C F
Sbjct: 126 KLFNIDILNHFFFVSVITNECPF 148
>Z81453-7|CAB03797.2| 457|Caenorhabditis elegans Hypothetical
protein B0250.9 protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 359 SLLVISNCIFCNLFISSNMFPEYCISKKF 273
S+ VISNC+FC + I S +F C +K+
Sbjct: 313 SVGVISNCLFCAVAIGSMVFTAKCDRQKY 341
>AF264764-1|AAQ14296.1| 457|Caenorhabditis elegans sterol reductase
protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 359 SLLVISNCIFCNLFISSNMFPEYCISKKF 273
S+ VISNC+FC + I S +F C +K+
Sbjct: 313 SVGVISNCLFCAVAIGSMVFTAKCDRQKY 341
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 307 LEDINKLQNIQFEITSKENKISEQTFMHKILNL---LPEKFNTFKSIWNNIDVEKKNLDE 477
LED N +FE + ++K E+TF+++ NL L ++ +W + +K +
Sbjct: 279 LEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSD 338
Query: 478 LTRRIKNELE 507
L + +L+
Sbjct: 339 LKTHTEEDLD 348
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 307 LEDINKLQNIQFEITSKENKISEQTFMHKILNL---LPEKFNTFKSIWNNIDVEKKNLDE 477
LED N +FE + ++K E+TF+++ NL L ++ +W + +K +
Sbjct: 352 LEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSD 411
Query: 478 LTRRIKNELE 507
L + +L+
Sbjct: 412 LKTHTEEDLD 421
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 307 LEDINKLQNIQFEITSKENKISEQTFMHKILNL---LPEKFNTFKSIWNNIDVEKKNLDE 477
LED N +FE + ++K E+TF+++ NL L ++ +W + +K +
Sbjct: 352 LEDENDRLRREFERYANDSKDKEKTFINRERNLAQYLSDEQRKMLDLWTELQRVRKQFSD 411
Query: 478 LTRRIKNELE 507
L + +L+
Sbjct: 412 LKTHTEEDLD 421
>Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical
protein Y57G11A.3 protein.
Length = 298
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/81 (24%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 325 LQNIQFEITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNID-VEKKNLDELTRRI-KN 498
+ NI+ E E KI+ K+ + EKF+ FK+ + NID ++L++ +R+ K
Sbjct: 78 VHNIENE--DDETKIARLEERQKLTEIGQEKFSKFKTKFENIDSTMDEDLEQKLKRMQKE 135
Query: 499 ELEFIKEDSIIESREILKGNE 561
++ + ++++ ++E + E
Sbjct: 136 QIGGVGKETLASAKERFEKGE 156
>AF099917-1|AAC68784.2| 188|Caenorhabditis elegans Hypothetical
protein F54D10.4 protein.
Length = 188
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +1
Query: 187 NLETIIEIFEKL--DFMYDFNIQGQDIKHVMNFFEMQYSGNILEDINKLQNIQFEITSKE 360
+LE +I L D + F ++ + IK + + +G I E+ L+N++ E+T +
Sbjct: 26 SLEALISALPPLSTDDVRFFTVKSEQIK------KRKKTGKIPENCENLKNLEQELTETK 79
Query: 361 NKISEQTFMHKIL 399
+K++++ H++L
Sbjct: 80 SKLAKKEMEHQVL 92
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 539 RDSMIESSLMNSNSFLILRVNSS-KFFFSTSILFQIDLKVLN-FSGNKFKILCINVCSEI 366
RD++ ++ +L+ ++N S F ST + +D+ F+ N F+ CIN C+E
Sbjct: 224 RDALAKAIYSKLFDWLVAQINKSIPFEKSTGYIGVLDVAGFGYFAVNSFEQFCINFCNEK 283
Query: 365 L 363
L
Sbjct: 284 L 284
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2
Query: 539 RDSMIESSLMNSNSFLILRVNSS-KFFFSTSILFQIDLKVLN-FSGNKFKILCINVCSEI 366
RD++ ++ +L+ ++N S F ST + +D+ F+ N F+ CIN C+E
Sbjct: 426 RDALAKAIYSKLFDWLVAQINKSIPFEKSTGYIGVLDVAGFEYFAVNSFEQFCINFCNEK 485
Query: 365 L 363
L
Sbjct: 486 L 486
>Z81123-4|CAB03367.2| 986|Caenorhabditis elegans Hypothetical
protein F46C5.6 protein.
Length = 986
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 31 NKDNYKAWRKLIKLLLDTKGIKIDDKNEEKLENKGKFII--FSYIEEK--YLHYVINLET 198
N+D K ++ ++ LLL+ I ++ E + K K +I S I + +L LET
Sbjct: 167 NEDLVKKFQGIVDLLLENILQNIQNQKEHHTQEKEKIVIKAGSSINNQMHHLSAAAWLET 226
Query: 199 IIEIFEKL 222
I+E+ +KL
Sbjct: 227 IVEVADKL 234
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 457 EKKNLDELTRRIKNELEFIKE 519
++K LDEL +RI ELE +KE
Sbjct: 24 DRKLLDELRKRIHKELELVKE 44
>Z54281-8|CAA91051.2| 986|Caenorhabditis elegans Hypothetical
protein F46C5.6 protein.
Length = 986
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 31 NKDNYKAWRKLIKLLLDTKGIKIDDKNEEKLENKGKFII--FSYIEEK--YLHYVINLET 198
N+D K ++ ++ LLL+ I ++ E + K K +I S I + +L LET
Sbjct: 167 NEDLVKKFQGIVDLLLENILQNIQNQKEHHTQEKEKIVIKAGSSINNQMHHLSAAAWLET 226
Query: 199 IIEIFEKL 222
I+E+ +KL
Sbjct: 227 IVEVADKL 234
>Z30662-2|CAA83135.1| 181|Caenorhabditis elegans Hypothetical
protein T16H12.2 protein.
Length = 181
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Frame = +1
Query: 430 KSIWNNIDVEKKNLDELTRRIKNELEFIKEDSIIESREILKGNEKR----------CFIC 579
+ + N + EK+ L++L R E + K ++ + +E L+GNE++ C+ C
Sbjct: 10 QDLTNRVQAEKEELEQLER----ERDLWKYNAQMNDKEALRGNERKKNIMKKGGPLCYFC 65
Query: 580 NK 585
NK
Sbjct: 66 NK 67
>AF036692-4|AAS47682.1| 318|Caenorhabditis elegans Serpentine
receptor, class x protein14 protein.
Length = 318
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 359 SLLVISNCIFCNLFISSNMFPEYCISKKFITCFIS 255
S+ NCIFC +FI S F E + TCFI+
Sbjct: 145 SIFSRQNCIFCLIFIFSLSFFEIGPLFAYETCFIA 179
>AC006648-3|AAF39855.1| 216|Caenorhabditis elegans Hypothetical
protein F59H6.6 protein.
Length = 216
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -2
Query: 551 FKISRDSMIESSLMNSNSFLILRVNSSKFFFSTSILFQIDLKVLNFSGNKFKIL 390
F R ++ E +LM S L+L + K S FQ DLK+LNFS K+L
Sbjct: 97 FSDRRLAVQEDALMRSE--LLLNIIRYKMLQFNSFQFQ-DLKLLNFSKKNSKLL 147
>Z81117-14|CAB03313.3| 272|Caenorhabditis elegans Hypothetical
protein T06E6.3 protein.
Length = 272
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 133 GKFIIFSYIEEKYLHYVINLETIIEIFEKLDFMYDFNIQ 249
G ++ Y Y H++I+L + +F + + FNI+
Sbjct: 52 GYILMICYKASTYFHFIISLNRFLSVFTPIFYNQMFNIK 90
>Z68104-1|CAA92112.1| 866|Caenorhabditis elegans Hypothetical
protein F08B12.1 protein.
Length = 866
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -2
Query: 392 LCINVCSEILFSLLVISNCIFCNLFISSNMFPEYCI 285
+C+ +C +L +++ISN + L+ + FP+Y +
Sbjct: 793 MCMLICLVLLIPIVIISNSLI-GLYSKMHAFPKYIV 827
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 19 KPFTNKDNYKAWRKLIKLLLDTKGIKIDDKNEEKLENK 132
K NK +YK W K+I+ K + +D ++K +NK
Sbjct: 125 KKAENKGDYKTWNKIIENSEFDKTLSENDGKKKKKKNK 162
>AC084159-11|ABO16465.1| 449|Caenorhabditis elegans F-box a protein
protein 221 protein.
Length = 449
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 331 NIQFEITSKENKISEQTFMHKILNLLPEKFNTFK-SIWNNIDVEKKNLDEL 480
N++ I S+E ++ T + K+L LLP N K + +N +K+N EL
Sbjct: 251 NMRCYIKSEEYRVEYGTILKKVLKLLPHLLNVKKLKLDSNFLRDKENNYEL 301
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 488 LRVNSSKFFFSTSILFQIDLKVLNFSG-NKFKILCINVCSEILFSLLV 348
+ V +S + + ++ +D+ G N F+ LCIN C+E L L +
Sbjct: 370 ISVQNSSRYSKSHVIGVLDIYGFEIFGTNSFEQLCINYCNEKLQQLFI 417
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 488 LRVNSSKFFFSTSILFQIDLKVLNFSG-NKFKILCINVCSEILFSLLV 348
+ V +S + + ++ +D+ G N F+ LCIN C+E L L +
Sbjct: 370 ISVQNSSRYSKSHVIGVLDIYGFEIFGTNSFEQLCINYCNEKLQQLFI 417
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 107 KMRKNWKIRGNL*YLVILKKNIYIM*LIWKQL*KFLKN*ILCMILIYKDKI 259
K+ KNWKI + ++ L +N+YI+ I+ ++ K L + ++ + KI
Sbjct: 166 KLLKNWKIFLKIRKMLSLSRNVYIIATIYVKIYKNLHYKMCKLLFVLVRKI 216
>Z93378-3|CAB07585.3| 749|Caenorhabditis elegans Hypothetical
protein F19H8.4 protein.
Length = 749
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = -2
Query: 395 ILCINVCSEILFSLLVISNCIFCNLFISSNMFPEYCISKKFITCFISCPCIL 240
IL + S +FS LV++ I +S N+F Y +S ++ + CP ++
Sbjct: 662 ILSPYLLSPYVFSPLVMAPFILNPYVLSPNVFNPYVLSPLILSPLVICPDVV 713
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 178 YVINLETIIEIFEKLDFMYDFNIQGQDIKHVMNFFEMQYSGN 303
YVI +ET +F D FN+ G + + F + GN
Sbjct: 2184 YVIAVETGYRMFATTDSTICFNLSGNEGDQIFRSFRSEEDGN 2225
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 178 YVINLETIIEIFEKLDFMYDFNIQGQDIKHVMNFFEMQYSGN 303
YVI +ET +F D FN+ G + + F + GN
Sbjct: 2184 YVIAVETGYRMFATTDSTICFNLSGNEGDQIFRSFRSEEDGN 2225
>U70848-4|AAB09108.1| 869|Caenorhabditis elegans Hypothetical
protein C43G2.2 protein.
Length = 869
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 322 KLQNIQFE--ITSKENKISEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIK 495
++QN++ +++K ++IS + K L E T S+ + EKK + E+ +++
Sbjct: 552 EMQNMKLRSLLSTKRDQISTLRTVLKSNKLTAESALT--SMREKYESEKKMMMEINDKMR 609
Query: 496 NELEFIKEDS 525
EL+ +KED+
Sbjct: 610 RELKQLKEDA 619
>U41533-1|AAA83162.2| 357|Caenorhabditis elegans Hypothetical
protein R05F9.7 protein.
Length = 357
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 376 QTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIKNELEFI 513
Q F+ KIL+LL E + W NI + L ++ + L+FI
Sbjct: 5 QEFLAKILSLLAEPIPLVEGQWLNITFDVPILVDINAPLTPTLQFI 50
>AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical
protein B0019.2 protein.
Length = 710
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 370 SEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIK 495
+E T M+ I + P K IW I V + +E+T+RIK
Sbjct: 326 NEPTLMNPITGIGPFTTEEDKMIWKFILVMLRGNNEITKRIK 367
>AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical
protein B0019.2 protein.
Length = 710
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 370 SEQTFMHKILNLLPEKFNTFKSIWNNIDVEKKNLDELTRRIK 495
+E T M+ I + P K IW I V + +E+T+RIK
Sbjct: 326 NEPTLMNPITGIGPFTTEEDKMIWKFILVMLRGNNEITKRIK 367
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 106 KNEEKLENKGKFIIFSYIEEKYLHYVIN 189
K +KL+N GK F KYL + +N
Sbjct: 7 KTNKKLKNSGKNCFFFQFSAKYLEFSVN 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,620,719
Number of Sequences: 27780
Number of extensions: 238681
Number of successful extensions: 1051
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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