Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26j13
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   3.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.7  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   8.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.9  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 223 KNSENAYADNMEVNGSNRCSWRRLDGFYDVCQKRKTG 333
           K  E A   N++V G+         G YD+  KR+ G
Sbjct: 295 KLEEIAGKFNLQVRGTRGEHTEAEGGIYDISNKRRLG 331


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 161 LDSVAWNSFYYFNSFMLPW 105
           ++ V  N++YY+   MLP+
Sbjct: 225 MEDVELNAYYYYMREMLPY 243



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 637 KTARFNWNK 663
           KTA F+WNK
Sbjct: 283 KTAEFDWNK 291


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 161 LDSVAWNSFYYFNSFMLPW 105
           ++ V  N++YY+   MLP+
Sbjct: 225 MEDVELNAYYYYMREMLPY 243



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 637 KTARFNWNK 663
           KTA F+WNK
Sbjct: 283 KTAEFDWNK 291


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 446 WMLIYFGFTHCPDICPDE 499
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 446 WMLIYFGFTHCPDICPDE 499
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 446 WMLIYFGFTHCPDICPDE 499
           + L+Y     CPD CP +
Sbjct: 343 FFLMYVIVPFCPDCCPSD 360


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 560 QPVFISVDPQRDTPELVGKYCKEFTPRLLG 649
           +P++ ++      P  V  YC  F PR +G
Sbjct: 332 KPLYYNIINIEQIPVPVPIYCGNFPPRPMG 361


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 652 NWNKGTSPASLQVL*SVLQCRAT 720
           NW+ GT    L V   VL C A+
Sbjct: 106 NWSFGTIMCDLWVSFDVLSCTAS 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,848
Number of Sequences: 438
Number of extensions: 4375
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)