Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26j10
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81109-8|CAB54296.1|  270|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81109-7|CAB03248.1|  268|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U64833-1|AAB04814.1|  857|Caenorhabditis elegans Hypothetical pr...    30   2.2  
L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AL132949-5|CAB61074.1|  144|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF025456-1|AAB70959.3|  438|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z81109-8|CAB54296.1|  270|Caenorhabditis elegans Hypothetical
           protein R10D12.13b protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 KDHTPVMLNEALKYLKPQDGELYVD 591
           K+  PV L+   KYL+P DG+++ D
Sbjct: 9   KEKLPVFLSRYQKYLEPVDGQIFAD 33


>Z81109-7|CAB03248.1|  268|Caenorhabditis elegans Hypothetical
           protein R10D12.13a protein.
          Length = 268

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 517 KDHTPVMLNEALKYLKPQDGELYVD 591
           K+  PV L+   KYL+P DG+++ D
Sbjct: 9   KEKLPVFLSRYQKYLEPVDGQIFAD 33


>U64833-1|AAB04814.1|  857|Caenorhabditis elegans Hypothetical
           protein B0507.6 protein.
          Length = 857

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +2

Query: 113 TQYKKFIKLIAKWPLDVTKGDRDLGKFIRDRVKFVFESPEKHNLDSEYCNRQYQALNRLA 292
           T + +F+K            +RD+G F  ++V F+F+S  +H +D +  N  Y     +A
Sbjct: 58  TYFNQFLKCFPVRNRQRLLSERDVG-FENEKVVFLFQSDFRHAIDMKNWNNFYFKYRDIA 116

Query: 293 D 295
           D
Sbjct: 117 D 117


>L07144-9|AAK21441.1|  737|Caenorhabditis elegans Hypothetical
           protein R05D3.2 protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = +2

Query: 119 YKKFIKLIAKWPLDVTKGDRDLGKFIRDRVKFVFESPEKHNLDSEYCNRQYQALNR--LA 292
           Y     ++ KW  DV K  ++     R+  ++V E+  + +  SE  +  + +  R   +
Sbjct: 392 YAATTPIVRKWDKDVPKKPKNPNFDYRNLKEYVKEARRQRSSLSESDDYWFGSPPRSSFS 451

Query: 293 DNHYRNKYKRTKSSTATGLSTEECNLI 373
            N+Y +++ R K ++ TGL+     L+
Sbjct: 452 ANYYSSRFSRWKHNSETGLNPSSSLLV 478


>U88184-7|AAK31516.1|  576|Caenorhabditis elegans Hypothetical
           protein F36H5.5 protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -3

Query: 148 FSYEFDKFLILSCHSYIFL 92
           F+Y+F K L+LS H+Y+FL
Sbjct: 355 FAYKFIKDLLLSYHTYLFL 373


>AL132949-5|CAB61074.1|  144|Caenorhabditis elegans Hypothetical
           protein Y53F4B.5 protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 197 RDRVKFVFESPEKHNLDSEYCNRQYQALNRLADNHYRNKYKRTKSSTATGLSTEE 361
           RDR++ + +  +K+  +  YC R + A  +  D H  N++      +    + EE
Sbjct: 50  RDRLEHIVKHVKKYPFNCPYCRRLF-ASQKEVDGHQENRHAELDWKSVEPFAEEE 103


>AF025456-1|AAB70959.3|  438|Caenorhabditis elegans Hypothetical
           protein C46F9.4 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 185 GKFIRDRVKFVFESPEKHNLD 247
           GKF R  V++ F+ PE H +D
Sbjct: 79  GKFFRRTVQYEFQKPEGHGMD 99


>AF003150-5|AAB54213.1|  474|Caenorhabditis elegans Hypothetical
           protein T05E7.1 protein.
          Length = 474

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = +2

Query: 176 RDLGKFIRDRVKFVFESPEKHNLDSEYCNRQY----QALNRLADNHYRNKYKRTKSSTAT 343
           +DL K I D     FE P ++  +S YC+ +     Q+   L  N+   KY +  +  A 
Sbjct: 227 KDLPKLIPDVDIEFFEKPIEYVQNSPYCSGKIGLVGQSFGGLTANYLSTKYHQVSAVVAL 286

Query: 344 GLSTEEC 364
             S   C
Sbjct: 287 NCSAAFC 293


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,128,957
Number of Sequences: 27780
Number of extensions: 302475
Number of successful extensions: 925
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)