Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26j06
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical ...   116   2e-26
Z71185-4|CAA94909.2|  483|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    29   2.6  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79597-1|CAB01861.1|  271|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical pr...    28   6.0  

>AC024744-4|AAK72071.3| 1192|Caenorhabditis elegans Hypothetical
           protein Y108G3AL.7 protein.
          Length = 1192

 Score =  116 bits (279), Expect = 2e-26
 Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = +1

Query: 334 AMQGDDPPYLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAG--GGTITVNDDVIKG 507
           A+  DDP +L +GT+VSAK+KGA+CEAKI+KV R++K KV+LK    G  I  ++D+   
Sbjct: 28  AVASDDPAFLALGTEVSAKFKGAYCEAKIQKVDRSLKVKVSLKESPFGQMIVQDNDLPNA 87

Query: 508 TLRIGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNES 687
              I    +V    K   +   I  I+D S+Y VVF+DGD   LRR+ L LK G+HF   
Sbjct: 88  KFEINELTDVVFQRK--FIRCQIQSIKDQSKYHVVFNDGDEKELRRTQLVLKGGKHFAAD 145

Query: 688 ETLDQLPLTHPEHFST 735
             LD +PLT+PE FST
Sbjct: 146 GNLDSMPLTNPESFST 161


>Z71185-4|CAA94909.2|  483|Caenorhabditis elegans Hypothetical
           protein C35A5.7 protein.
          Length = 483

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +2

Query: 311 SIYW----FY*SQCRVMIHPTCQWGLMLVQNTRVHSVR 412
           +IYW    +Y SQ  V+ H T  W  +L+   RV S+R
Sbjct: 97  NIYWAYFLYYHSQATVIFHATSIWLTVLLAQIRVFSIR 134


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 409 EAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGSTVEVKQDPKKDAMEAVITKIQ 588
           E + KK V  +    + +AG G  T  DD    T    +       PK  A++ +I+++Q
Sbjct: 425 EQRAKKTVNAVAAAFSTQAGSGNATTVDDPASTTTSKENPAAQPPKPKSAAVQNLISQLQ 484


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/60 (26%), Positives = 27/60 (45%)
 Frame = +1

Query: 409 EAKIKKVVRNIKCKVTLKAGGGTITVNDDVIKGTLRIGSTVEVKQDPKKDAMEAVITKIQ 588
           E + KK V  +    + +AG G  T  DD    T    +       PK  A++ +I+++Q
Sbjct: 425 EQRAKKTVNAVAAAFSTQAGSGNATTVDDPASTTTSKENPAAQPPKPKSAAVQNLISQLQ 484


>Z81541-6|CAB04413.2|  326|Caenorhabditis elegans Hypothetical
           protein F48F5.4 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = -2

Query: 183 DSCESKFKIY---YHVICSLLLFTMCI-IFPF*SKFVRHVNVNIMKSHSNPMFS 34
           D+    F IY   + VICS+L FTM I I+ F +K ++ + + +  S++  M S
Sbjct: 2   DTLYHVFHIYWPVFFVICSILYFTMYILIYNFTTKILKPMRIFLYSSNAAMMSS 55


>Z79597-1|CAB01861.1|  271|Caenorhabditis elegans Hypothetical
           protein C33A11.2 protein.
          Length = 271

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 597 TAILYFSNDSFHCIFFRILFHFYS-TSNPQCTFYYIIIHSNCSSTSFKCNFAFNI 436
           +A+  F   S + IF   L H  + T   +  FYY +I +  S   F C+F F I
Sbjct: 128 SAVASFGGFSIYMIFQCYLTHRVTPTITLRTVFYYRVIFTIFSVICFCCSFGFGI 182


>U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical
           protein ZC395.8 protein.
          Length = 687

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 533 STVLPILNVPFITSSFTVIVPPPALS 456
           ++ LP + +P I S +  IVPPPA S
Sbjct: 531 NSTLPSIPIPSIFSPYEPIVPPPATS 556


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,497,223
Number of Sequences: 27780
Number of extensions: 388753
Number of successful extensions: 1053
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)