BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26j01
(706 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long fo... 27 0.43
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 5.4
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 7.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 7.1
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 7.1
AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal prot... 23 9.4
>AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long form
protein.
Length = 311
Score = 27.5 bits (58), Expect = 0.43
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 554 HNPVGRRGEEFCSDFRVDKQNITNYITMCYVRKT*AS---WIPAFPNIPPTNLPVHHPPY 384
H P G E + ++ K + +T CYV+ T A + P +PV H Y
Sbjct: 41 HLPSGPNRETYLKTWKFWKLEPNDAVTHCYVKCTLAGLQMYDEKTNTFKPETVPVQHEAY 100
Query: 383 KN 378
K+
Sbjct: 101 KS 102
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -3
Query: 215 SAVGLPRQRPNGPPGSRLSVDVHSVTT--TLLDRRYFGNIR 99
+A GL Q+P+ PP + + + T T + Y+ +++
Sbjct: 1380 AAAGLHHQQPSSPPTQTIGIPLSPTETEATSSEHEYYNDLQ 1420
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.4 bits (48), Expect = 7.1
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 576 MSEPTDSMIIDIVKSATDTQNIDNAIGISALEYEPTIPTRFM 701
M EP +I+D + N G EY P+ +FM
Sbjct: 313 MDEPKKILIVDARSYTSAVTNRARGGGCECAEYYPSAEIQFM 354
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 447 QLDPRLSEHPTNQPARSSS 391
Q P+LS+HP RSS+
Sbjct: 839 QTQPQLSQHPPGASGRSSA 857
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.4 bits (48), Expect = 7.1
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 576 MSEPTDSMIIDIVKSATDTQNIDNAIGISALEYEPTIPTRFM 701
M EP +I+D + N G EY P+ +FM
Sbjct: 313 MDEPKKILIVDARSYTSAVTNRARGGGCECAEYYPSAEIQFM 354
>AF079312-1|AAC28093.1| 271|Anopheles gambiae 60S ribosomal protein
rpL7a protein.
Length = 271
Score = 23.0 bits (47), Expect = 9.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 106 FPKYLRSRRVVVTL*TSTESLEPGGPFGRCRGKPTAEQ 219
+PKY+R +R L + P F + KPTA+Q
Sbjct: 63 WPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQ 100
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,948
Number of Sequences: 2352
Number of extensions: 17193
Number of successful extensions: 255
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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