Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26j01
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 38 0.005
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 36 0.028
AC025716-6|AAK95889.1| 401|Caenorhabditis elegans Hypothetical ... 35 0.065
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 34 0.11
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 33 0.15
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 33 0.15
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.15
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 33 0.15
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 32 0.35
U23176-5|AAX88833.1| 241|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 30 1.4
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 30 1.4
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 30 1.4
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 30 1.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 29 4.3
AL132904-15|CAC35848.2| 518|Caenorhabditis elegans Hypothetical... 29 4.3
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 29 4.3
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 29 4.3
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 28 5.7
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 28 5.7
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 28 7.5
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 28 7.5
AF031841-1|AAC13677.1| 601|Caenorhabditis elegans GLY7 protein. 28 7.5
AC006774-7|AAF60620.1| 601|Caenorhabditis elegans Glycosylation... 28 7.5
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 27 9.9
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 357 YNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCLPHV-AHRDIVRNVLFINSKIGAEFFS 533
+NP+ ++V G + V WDV+ G+C+ + AH D V V F ++ G+ S
Sbjct: 179 FNPQSS-LVVSGSFDESVRIWDVK-----TGMCIKTLPAHSDPVSAVSF--NRDGSLIAS 230
Query: 534 SSPDGVVKWWDTRN 575
S DG+V+ WDT N
Sbjct: 231 GSYDGLVRIWDTAN 244
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 417 WDVRKGGDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWWDTRNMSEPTDS 596
W +++GG A P H+ V ++ + ++ G S S DG +K WDTR S P D+
Sbjct: 256 WQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGL-LASCSADGSIKLWDTR--SAPKDA 312
Query: 597 MIIDIVKSATDTQNI 641
+ + K+ N+
Sbjct: 313 CVCTVQKAHESDVNV 327
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +3
Query: 348 DLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCLPHVAHRDIVRNVLFINSKIGAEF 527
DL ++P + +L +G + WD R A +C AH V NV+ N
Sbjct: 280 DLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDV-NVISWNRHENL-I 337
Query: 528 FSSSPDGVVKWWDTRNM 578
S DG +K W + +
Sbjct: 338 VSGGDDGELKIWSLKTI 354
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +3
Query: 285 IWDIENAN-APELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLC-- 455
+W+ ++ E ++ + + + H+L+ G +GQ+ WD R +
Sbjct: 318 VWNTKSKRMTAEFIVYCQSEIQSVAFARFHAHLLLAGCESGQICVWDNRLTSRKLPINRS 377
Query: 456 -LPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWWDTRNMSEPTD 593
L AH V + + +K F S S DG + W+ N+++P D
Sbjct: 378 PLTTQAHTYTVSCLAVVGTKNAHNFVSLSRDGRICSWNVDNLTQPVD 424
>AC025716-6|AAK95889.1| 401|Caenorhabditis elegans Hypothetical
protein Y39G10AR.9 protein.
Length = 401
Score = 34.7 bits (76), Expect = 0.065
Identities = 26/91 (28%), Positives = 43/91 (47%)
Frame = +3
Query: 378 ILVGGMMNGQVGWWDVRKGGDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVK 557
+++GG M+ + W V K PA V H V I +G EF S S DG V+
Sbjct: 167 VVIGGGMDMAIRVWAVDKV--PAQKTF--VGHTKAVTGFGIIG--VGREFLSCSNDGTVR 220
Query: 558 WWDTRNMSEPTDSMIIDIVKSATDTQNIDNA 650
+W +N + PT++ + K ++D++
Sbjct: 221 FWSCKN-AAPTETWSFEKGKCIDMAMSVDDS 250
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/104 (24%), Positives = 42/104 (40%)
Frame = +3
Query: 285 IWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCLPH 464
+WD+ + + + + +NP ++IL G ++ V WD+R L H
Sbjct: 248 LWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKM-YTLKH 306
Query: 465 VAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWWDTRNMSEPTDS 596
H D + V F + SS D V WD + +P+ S
Sbjct: 307 --HNDEIFQVSF-SPHYETVLASSGSDDRVIVWDISKIQDPSSS 347
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 435 GDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWW 563
GD G+ + + R I RN F K G F + DGV K+W
Sbjct: 457 GDAEGVTISDIEERTIDRNTPFSFFKTGYLTFDGTTDGVAKYW 499
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/101 (24%), Positives = 40/101 (39%)
Frame = +3
Query: 285 IWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCLPH 464
+WD+E ++ + L+ +Q +++ + WD R+ +
Sbjct: 306 VWDVEKGEVVN-ILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAV---F 361
Query: 465 VAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWWDTRNMSEP 587
H+D V +V F SSS D VK WD RNM P
Sbjct: 362 QGHQDSVTSVSF---NTDYRIVSSSDDATVKIWDLRNMRTP 399
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/101 (24%), Positives = 40/101 (39%)
Frame = +3
Query: 285 IWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCLPH 464
+WD+E ++ + L+ +Q +++ + WD R+ +
Sbjct: 304 VWDVEKGEVVN-ILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAV---F 359
Query: 465 VAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWWDTRNMSEP 587
H+D V +V F SSS D VK WD RNM P
Sbjct: 360 QGHQDSVTSVSF---NTDYRIVSSSDDATVKIWDLRNMRTP 397
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/108 (23%), Positives = 47/108 (43%)
Frame = +3
Query: 246 ELMRSCRSSQFSYIWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDV 425
+L+ SC + ++D+ + + + + +NP ++ G + + W
Sbjct: 161 KLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGT-LIASGSFDETIRIWCA 219
Query: 426 RKGGDPAGLCLPHVAHRDIVRNVLFINSKIGAEFFSSSPDGVVKWWDT 569
R G +P H D V +V F ++ GA S S DG+V+ WD+
Sbjct: 220 RNGNTI--FSIP--GHEDPVSSVCF--NRDGAYLASGSYDGIVRIWDS 261
>U23176-5|AAX88833.1| 241|Caenorhabditis elegans Hypothetical
protein F21H12.7 protein.
Length = 241
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 48 EHNILQNNAIDMFESYYSDVPEIPPVEK 131
+ +LQ IDMF+SY S+V +PP ++
Sbjct: 46 QDQVLQQCYIDMFQSYGSNVTSLPPADE 73
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVAHRDIVRNVLF--INSKIGAEFFSSSPDG 548
H++ M VG W R+G + P+ ++ R+++ +NS G++F ++ D
Sbjct: 790 HVVFAEKMRKDVGHWMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSSTGSDFLYNTNDK 849
Query: 549 VVKWWDTRN 575
+ DT N
Sbjct: 850 YLTNSDTTN 858
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVAHRDIVRNVLF--INSKIGAEFFSSSPDG 548
H++ M VG W R+G + P+ ++ R+++ +NS G++F ++ D
Sbjct: 792 HVVFAEKMRKDVGHWMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSSTGSDFLYNTNDK 851
Query: 549 VVKWWDTRN 575
+ DT N
Sbjct: 852 YLTNSDTTN 860
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVAHRDIVRNVLF--INSKIGAEFFSSSPDG 548
H++ M VG W R+G + P+ ++ R+++ +NS G++F ++ D
Sbjct: 790 HVVFAEKMRKDVGHWMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSSTGSDFLYNTNDK 849
Query: 549 VVKWWDTRN 575
+ DT N
Sbjct: 850 YLTNSDTTN 858
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVAHRDIVRNVLF--INSKIGAEFFSSSPDG 548
H++ M VG W R+G + P+ ++ R+++ +NS G++F ++ D
Sbjct: 792 HVVFAEKMRKDVGHWMYRRGCGGSSNSSPNHKRHNVQRDLMSPGVNSSTGSDFLYNTNDK 851
Query: 549 VVKWWDTRN 575
+ DT N
Sbjct: 852 YLTNSDTTN 860
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +3
Query: 285 IWDIENANAPELVIKP--PQPLLDLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCL 458
+WD N P P P + L++N +++ + + + +V +WD+R+ G P L
Sbjct: 147 LWDCANLKTPFSPGSPNFPDQVKLLRWNLKNESVFAS-ISSRRVSFWDLRRNGSPV-LEF 204
Query: 459 PHVAHRDIVRNVLFINSKIGAEFFSSSPD---GVVKWWDTRNMSEP 587
+ D + L N ++ SS V++ WD+R S P
Sbjct: 205 AEIPGCD--WSSLSWNPSDASQLIVSSQSQHASVIQKWDSRFTSTP 248
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +3
Query: 285 IWDIENANAPELVIKP--PQPLLDLQYNPRDQHILVGGMMNGQVGWWDVRKGGDPAGLCL 458
+WD N P P P + L++N +++ + + + +V +WD+R+ G P L
Sbjct: 147 LWDCANLKTPFSPGSPNFPDQVKLLRWNLKNESVFAS-ISSRRVSFWDLRRNGSPV-LEF 204
Query: 459 PHVAHRDIVRNVLFINSKIGAEFFSSSPD---GVVKWWDTRNMSEP 587
+ D + L N ++ SS V++ WD+R S P
Sbjct: 205 AEIPGCD--WSSLSWNPSDASQLIVSSQSQHASVIQKWDSRFTSTP 248
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 468 AHRDIVRNVLFINSKIGAEF-FSSSPDGVVKWWDTRNMSE 584
AH D V +V F + +G+ +S+ DG+VK WD R S+
Sbjct: 268 AHEDDVNSVCFAD--LGSNLIYSAGDDGLVKVWDKRAWSD 305
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 468 AHRDIVRNVLFINSKIGAEF-FSSSPDGVVKWWDTRNMSE 584
AH D V +V F + +G+ +S+ DG+VK WD R S+
Sbjct: 309 AHEDDVNSVCFAD--LGSNLIYSAGDDGLVKVWDKRAWSD 346
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 285 IWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVR 428
IWD+ + + + L +NP + IL G + V WD+R
Sbjct: 249 IWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
>AL132904-15|CAC35848.2| 518|Caenorhabditis elegans Hypothetical
protein Y111B2A.19 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 117 VFREHQSNKTRTYL*RCSEVCCVPYLFKNVFIA 19
+FR H + K Y+ S +P+LF +FIA
Sbjct: 313 IFRNHATEKADVYICALSMFVALPFLFFAIFIA 345
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 285 IWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVR 428
IWD+ + + + L +NP + IL G + V WD+R
Sbjct: 249 IWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +3
Query: 285 IWDIENANAPELVIKPPQPLLDLQYNPRDQHILVGGMMNGQVGWWDVR 428
IWD+ + + + L +NP + IL G + V WD+R
Sbjct: 249 IWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLR 296
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 422 IPPTNLPVHHPPYKNMLVARV 360
+P PV HPPY NM+ A +
Sbjct: 29 VPKAKKPVAHPPYINMVTAAI 49
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 422 IPPTNLPVHHPPYKNMLVARV 360
+P PV HPPY NM+ A +
Sbjct: 29 VPKAKKPVAHPPYINMVTAAI 49
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 566 IPPFHNPVGRRGEEFCSDFRVDKQNITN 483
IPP P+GR G C D R + ++ N
Sbjct: 154 IPPVDTPIGRLGLSICYDVRFPELSLWN 181
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 566 IPPFHNPVGRRGEEFCSDFRVDKQNITN 483
IPP P+GR G C D R + ++ N
Sbjct: 154 IPPVDTPIGRLGLSICYDVRFPELSLWN 181
>AF031841-1|AAC13677.1| 601|Caenorhabditis elegans GLY7 protein.
Length = 601
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 471 VLRAEDIGQLDPRLSEHPTNQPARSSSPL 385
+ R ++G +P+ E P+NQP P+
Sbjct: 76 IFRGSELGNYEPKEPEIPSNQPGEHGKPV 104
>AC006774-7|AAF60620.1| 601|Caenorhabditis elegans Glycosylation
related protein 7 protein.
Length = 601
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 471 VLRAEDIGQLDPRLSEHPTNQPARSSSPL 385
+ R ++G +P+ E P+NQP P+
Sbjct: 76 IFRGSELGNYEPKEPEIPSNQPGEHGKPV 104
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVA-HRDIVRNVLFINSKIGAEFFSSSPDGV 551
+ILV + V WD+ +G C+ ++ HR + ++ + + A +SS DG
Sbjct: 472 NILVSCNADSHVRVWDIHEG-----TCVHMLSGHRSAITSLQWFGRNMVA---TSSDDGT 523
Query: 552 VKWWDTRNMSEPTDSMIID 608
VK WD + D + +D
Sbjct: 524 VKLWDIERGALIRDLVTLD 542
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVA-HRDIVRNVLFINSKIGAEFFSSSPDGV 551
+ILV + V WD+ +G C+ ++ HR + ++ + + A +SS DG
Sbjct: 474 NILVSCNADSHVRVWDIHEG-----TCVHMLSGHRSAITSLQWFGRNMVA---TSSDDGT 525
Query: 552 VKWWDTRNMSEPTDSMIID 608
VK WD + D + +D
Sbjct: 526 VKLWDIERGALIRDLVTLD 544
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 375 HILVGGMMNGQVGWWDVRKGGDPAGLCLPHVA-HRDIVRNVLFINSKIGAEFFSSSPDGV 551
+ILV + V WD+ +G C+ ++ HR + ++ + + A +SS DG
Sbjct: 474 NILVSCNADSHVRVWDIHEG-----TCVHMLSGHRSAITSLQWFGRNMVA---TSSDDGT 525
Query: 552 VKWWDTRNMSEPTDSMIID 608
VK WD + D + +D
Sbjct: 526 VKLWDIERGALIRDLVTLD 544
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,285,840
Number of Sequences: 27780
Number of extensions: 392919
Number of successful extensions: 1296
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -