Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26i19
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130466-1|AAI30467.1| 1137|Homo sapiens adaptor-related protein...    31   5.9  
BC126308-1|AAI26309.1| 1137|Homo sapiens adaptor-related protein...    31   5.9  
AF155156-1|AAD43326.2| 1135|Homo sapiens adaptor-related protein...    31   5.9  
AB030653-1|BAA82969.1| 1137|Homo sapiens epsilon-adaptin protein.      31   5.9  

>BC130466-1|AAI30467.1| 1137|Homo sapiens adaptor-related protein
           complex 4, epsilon 1 subunit protein.
          Length = 1137

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 403 LKKFSVQSDLFSSDPLHVLPLCFNFLYRASLKFGSIF 293
           LKKFS+ S+L  S+ L  LPL   F Y  SL   S+F
Sbjct: 843 LKKFSLTSELLDSESLTELPLVEKFSY-CSLSTPSLF 878


>BC126308-1|AAI26309.1| 1137|Homo sapiens adaptor-related protein
           complex 4, epsilon 1 subunit protein.
          Length = 1137

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 403 LKKFSVQSDLFSSDPLHVLPLCFNFLYRASLKFGSIF 293
           LKKFS+ S+L  S+ L  LPL   F Y  SL   S+F
Sbjct: 843 LKKFSLTSELLDSESLTELPLVEKFSY-CSLSTPSLF 878


>AF155156-1|AAD43326.2| 1135|Homo sapiens adaptor-related protein
           complex AP-4 epsilon subunit protein.
          Length = 1135

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 403 LKKFSVQSDLFSSDPLHVLPLCFNFLYRASLKFGSIF 293
           LKKFS+ S+L  S+ L  LPL   F Y  SL   S+F
Sbjct: 841 LKKFSLTSELLDSESLTELPLVEKFSY-CSLSTPSLF 876


>AB030653-1|BAA82969.1| 1137|Homo sapiens epsilon-adaptin protein.
          Length = 1137

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 403 LKKFSVQSDLFSSDPLHVLPLCFNFLYRASLKFGSIF 293
           LKKFS+ S+L  S+ L  LPL   F Y  SL   S+F
Sbjct: 843 LKKFSLTSELLDSESLTELPLVEKFSY-CSLSTPSLF 878


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,634,104
Number of Sequences: 237096
Number of extensions: 1841763
Number of successful extensions: 3499
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3499
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)