Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26i19
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   5.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   7.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   7.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   7.1  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 149 NWTQAEKQYLLELIKVRKDVVVTKNNNGPNYSEEKDIAWNEILRELSIKY 298
           N +    Q + + I   K+ ++   NN  + +EEK    NE L  +   Y
Sbjct: 408 NGSMEINQNIAQNIDHAKNTIIDYRNNDLSINEEKRTIENEQLNRMYKSY 457


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 407  TSEKILRSKRPLLERSSSCSAI 342
            T +KI  + RP++  +S C+A+
Sbjct: 1697 TDDKICFTMRPVVSCASGCTAV 1718


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 68  SLQKIN-HNPSHTFKMGKVPNNRRLRTPNW 154
           SL+ I  +N  + +  GK+ N +R+   NW
Sbjct: 135 SLKNIEPYNNYYIWHPGKIVNGKRVPPTNW 164


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 47  ECIVCNKSLQKINHNPSHTFKMGK 118
           +C++C K+  + N   SH    GK
Sbjct: 63  QCLLCQKAFDQKNLYQSHLRSHGK 86


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 68  SLQKIN-HNPSHTFKMGKVPNNRRLRTPNW 154
           SL+ I  +N  + +  GK+ N +R+   NW
Sbjct: 135 SLKNIEPYNNYYIWHPGKIVNGKRVPPTNW 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,462
Number of Sequences: 438
Number of extensions: 4111
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)