Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26i07
         (707 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023...    29   2.7  
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592...    29   2.7  
01_07_0113 + 41158666-41159615,41159695-41160076                       29   4.8  
07_01_1180 - 11188789-11188797,11189032-11189068,11190328-111903...    28   6.3  
02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003...    28   6.3  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    28   6.3  

>06_03_0668 +
           23301578-23301791,23302102-23302199,23302233-23302301,
           23302674-23302961,23303045-23303208,23303344-23303599,
           23303706-23303816,23304109-23304195,23305916-23305985,
           23306093-23306149,23306309-23306426,23307314-23307403,
           23307492-23307671,23307816-23307893,23308016-23308088
          Length = 650

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 291 LVQLMK-SKIDDGSLIYIGSSAGTNVATKSIHTTNDMPIIYPPSFEAIGI 437
           LV LMK  K+ D +   IG   G +   K I    ++PI +P  FE++GI
Sbjct: 173 LVNLMKVEKVPDSTYDMIG---GLDQQIKEIKEVIELPIKHPELFESLGI 219


>02_01_0789 -
           5919271-5919411,5920105-5920215,5920303-5920401,
           5920486-5920642,5920774-5920937,5921017-5921079,
           5921153-5921377,5922038-5922135,5923283-5923499
          Length = 424

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 291 LVQLMK-SKIDDGSLIYIGSSAGTNVATKSIHTTNDMPIIYPPSFEAIGI 437
           LV LMK  K+ D +   IG   G +   K I    ++PI +P  FE++GI
Sbjct: 151 LVNLMKVEKVPDSTYDMIG---GLDQQIKEIKEVIELPIKHPELFESLGI 197


>01_07_0113 + 41158666-41159615,41159695-41160076
          Length = 443

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 345 SSAGTNVATKSIHTTNDMPIIYPPSFEAIG 434
           S+      T S +TTN   ++YP SF A+G
Sbjct: 130 STGDLTTFTMSANTTNGTDLLYPESFTAVG 159


>07_01_1180 -
           11188789-11188797,11189032-11189068,11190328-11190392,
           11190464-11190562,11190707-11190878,11190973-11191325,
           11191451-11191561,11191637-11191708,11192203-11192420,
           11192546-11192594,11192697-11192750,11192876-11192958,
           11193088-11193304,11193387-11193510,11194042-11194105,
           11194413-11194500,11194623-11194724,11194842-11194937
          Length = 670

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 411 PPSFEAIGIVPFNINPHYIDKVENEEHKGETRDQRIAEYLE 533
           P       I+P +++ +  D  +N+E+  E +DQ I   LE
Sbjct: 358 PTELNKTKIIPLDLSQNLYDLSQNQENNSENKDQLIMVTLE 398


>02_05_0046 -
           25398412-25398594,25399022-25399060,25399896-25400360,
           25400758-25400816,25400920-25401748,25402554-25402898,
           25402973-25403435,25403537-25403640,25403692-25403901,
           25404933-25405088,25405774-25406052,25406237-25406986,
           25407141-25407232,25407977-25408361,25408672-25408752,
           25409196-25409354,25409399-25409506,25409604-25409666,
           25409764-25409835,25409932-25410366
          Length = 1758

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 447 NINPHYIDKVENEEHK--GETRDQRIAEYLEMQHAAPVLGLK 566
           +++P  +D++ N +     ETR    A+  + QH   +LGL+
Sbjct: 537 DLSPELVDQIRNRQRNFDTETRSGAAAKLKQNQHTTAILGLR 578


>02_01_0369 +
           2649178-2655291,2655773-2656601,2656737-2657425,
           2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +3

Query: 477 ENEEHKGETRDQRIAEYLEMQHAAPVLGLKEGAILHV---DGSKLILKG 614
           E  +  G  +D  ++E+  ++H  P  G  EGA + V   DGS L+++G
Sbjct: 131 EGGDGGGNAQDVGVSEHGSLEHVNPGPGDGEGATIPVTGADGSGLLIEG 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,838,919
Number of Sequences: 37544
Number of extensions: 347903
Number of successful extensions: 849
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)