Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26i07
         (707 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-8|CAA19491.1|  483|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z82285-4|CAD56247.1|  392|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z81583-5|CAB04673.1|  574|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z34802-1|CAA84336.1|  531|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z29094-12|CAA82340.2|  313|Caenorhabditis elegans Hypothetical p...    27   9.9  
AL032640-3|CAA21641.2|  424|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AL023835-8|CAA19491.1|  483|Caenorhabditis elegans Hypothetical
           protein Y37A1B.8 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 374 FCCYICSRTASNVY*TTIIN 315
           FCCY C  T S ++  T++N
Sbjct: 114 FCCYTCKLTISKLFGLTVVN 133


>Z82285-4|CAD56247.1|  392|Caenorhabditis elegans Hypothetical
           protein T28F3.4b protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 398 HI-ICCMNTFCCYICSRTASNVY*TTIINFTFH*LD*VIFVQSFQK*KSI 252
           HI + CM  FCC    R    +  T +IN T   L+  +F ++F+   SI
Sbjct: 32  HICLLCMAGFCCTTFMRMHIAISMTCMINSTALALESAVFPEAFENSSSI 81


>Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical
           protein T28F3.4a protein.
          Length = 573

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -1

Query: 398 HI-ICCMNTFCCYICSRTASNVY*TTIINFTFH*LD*VIFVQSFQK*KSI 252
           HI + CM  FCC    R    +  T +IN T   L+  +F ++F+   SI
Sbjct: 32  HICLLCMAGFCCTTFMRMHIAISMTCMINSTALALESAVFPEAFENSSSI 81


>Z81583-5|CAB04673.1|  574|Caenorhabditis elegans Hypothetical
           protein T02G6.5 protein.
          Length = 574

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/57 (24%), Positives = 29/57 (50%)
 Frame = -2

Query: 376 LFVATFVPALLPMYIKLPSSILLFINWTKLFLYNLFKSKKVFPPPIKIALDSLIAVS 206
           L +AT + A + ++ K+P  +    ++T    + L  S  VF   +  A+D +++ S
Sbjct: 146 LMLATIMTAFIVIFFKMPGKVFCSHDYTYFKTFQLLISDVVFKTILFEAMDEVLSNS 202


>Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical
           protein C44C10.7 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 346 LPMYIKLPSSILLFINWTKLFLYNLFKSKKVFP 248
           L ++ KL  S++LF++    FL +L  SK  FP
Sbjct: 10  LQLFHKLSISLILFLHHFSCFLTDLQSSKMTFP 42


>Z34802-1|CAA84336.1|  531|Caenorhabditis elegans Hypothetical
           protein M88.1 protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 87  KDLIFIPYAQNDFDGYTTKIKNVIDQWGFTVTGLHTYPKPE 209
           K  +F+PY  N    + T++  V+   G  VT +H    P+
Sbjct: 18  KYAVFVPYMANSQVQFCTRVAEVLANGGHDVTMIHLSHLPD 58


>Z29094-12|CAA82340.2|  313|Caenorhabditis elegans Hypothetical
           protein C07A9.1 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +3

Query: 273 RLYKNNLVQLMKSKIDDGSLIYIGSSAGTNVATKSIHTTNDMPI-IYPPSFEAIGIVPFN 449
           RLY  N +  +K++ + G  +Y+      N++T      +  PI I  P    I + P  
Sbjct: 187 RLYSKNEIGPLKTEAETGEKVYL---KPINISTNGFPEFSGPPIVILNPYKRKIKVKPVM 243

Query: 450 INPHYIDKVENEEHKGETRD 509
           ++    +   + + K ET D
Sbjct: 244 VSQTETEMSRSRKEKEETED 263


>AL032640-3|CAA21641.2|  424|Caenorhabditis elegans Hypothetical
           protein Y43F8A.3 protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 300 LMKSKIDDGSLIYIGSSAGTNVAT 371
           L K KID   +I +G SAG N+AT
Sbjct: 187 LEKFKIDPKKVILVGDSAGGNLAT 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,952,128
Number of Sequences: 27780
Number of extensions: 331096
Number of successful extensions: 837
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)