Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26i01
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007203-1|AAP35867.1| 172|Homo sapiens sorting nexin 12 protein. 164 3e-40
BC103848-1|AAI03849.1| 162|Homo sapiens sorting nexin 12 protein. 164 3e-40
BC103847-1|AAI03848.1| 162|Homo sapiens sorting nexin 12 protein. 164 3e-40
AF171229-1|AAD48491.1| 162|Homo sapiens sorting nexin 12 protein. 162 9e-40
Z98742-5|CAI95646.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
CR456898-1|CAG33179.1| 162|Homo sapiens SNX3 protein. 152 1e-36
BT007114-1|AAP35778.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
BC015179-1|AAH15179.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
BC014580-1|AAH14580.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
BC008444-1|AAH08444.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
AL078596-4|CAI20819.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
AF034546-1|AAC16040.1| 162|Homo sapiens sorting nexin 3 protein. 152 1e-36
AF062483-1|AAC16018.1| 162|Homo sapiens SDP3 protein. 148 2e-35
BC016863-1|AAH16863.1| 113|Homo sapiens SNX3 protein protein. 119 8e-27
Z98742-6|CAI95647.1| 140|Homo sapiens sorting nexin 3 protein. 105 1e-22
AL078596-5|CAI20817.1| 140|Homo sapiens sorting nexin 3 protein. 105 1e-22
Z98742-7|CAI95648.1| 130|Homo sapiens sorting nexin 3 protein. 62 4e-15
AL078596-6|CAI20818.1| 130|Homo sapiens sorting nexin 3 protein. 62 4e-15
AB047360-1|BAB32649.1| 130|Homo sapiens sorting nexin 3A protein. 62 4e-15
BT006723-1|AAP35369.1| 270|Homo sapiens sorting nexin 11 protein. 58 2e-08
BC103721-1|AAI03722.1| 270|Homo sapiens sorting nexin 11 protein. 58 2e-08
BC000768-1|AAH00768.1| 270|Homo sapiens sorting nexin 11 protein. 58 2e-08
AK023932-1|BAB14732.1| 270|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AF121861-1|AAD27834.1| 264|Homo sapiens sorting nexin 11 protein. 58 2e-08
BC034992-1|AAH34992.1| 201|Homo sapiens sorting nexin 10 protein. 52 1e-06
BC031050-1|AAH31050.1| 201|Homo sapiens sorting nexin 10 protein. 52 1e-06
AF121860-1|AAD27833.1| 201|Homo sapiens sorting nexin 10 protein. 52 1e-06
AC074295-1|AAS07476.1| 103|Homo sapiens unknown protein. 52 1e-06
AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein. 49 1e-05
U53225-1|AAA98672.1| 522|Homo sapiens sorting nexin 1 protein. 49 2e-05
BT006983-1|AAP35629.1| 522|Homo sapiens sorting nexin 1 protein. 49 2e-05
BC000357-1|AAH00357.1| 522|Homo sapiens sorting nexin 1 protein. 49 2e-05
AK222793-1|BAD96513.1| 522|Homo sapiens sorting nexin 1 isoform... 49 2e-05
AK222561-1|BAD96281.1| 522|Homo sapiens sorting nexin 1 isoform... 49 2e-05
AK128179-1|BAC87312.1| 557|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AB209013-1|BAD92250.1| 432|Homo sapiens sorting nexin 1 isoform... 49 2e-05
AL390067-5|CAH71937.1| 437|Homo sapiens sorting nexin family me... 48 3e-05
AL360235-2|CAI41353.1| 437|Homo sapiens sorting nexin family me... 48 3e-05
AL139041-3|CAI95198.1| 437|Homo sapiens sorting nexin family me... 48 3e-05
AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein. 48 3e-05
BT009841-1|AAP88843.1| 519|Homo sapiens sorting nexin 2 protein. 44 7e-04
BC003382-1|AAH03382.1| 519|Homo sapiens sorting nexin 2 protein. 44 7e-04
AY272044-1|AAQ02693.1| 519|Homo sapiens transformation-related ... 44 7e-04
AF065482-1|AAC17181.1| 519|Homo sapiens sorting nexin 2 protein. 44 7e-04
BT006747-1|AAP35393.1| 336|Homo sapiens sorting nexin 7 protein. 43 0.001
BC018105-1|AAH18105.1| 336|Homo sapiens sorting nexin 7 protein. 43 0.001
BC010349-1|AAH10349.1| 387|Homo sapiens sorting nexin 7 protein. 43 0.001
AL627442-2|CAH72125.1| 387|Homo sapiens sorting nexin 7 protein. 43 0.001
AL627442-1|CAH72126.1| 336|Homo sapiens sorting nexin 7 protein. 43 0.001
AL049989-1|CAB43229.1| 420|Homo sapiens hypothetical protein pr... 43 0.001
AF121857-1|AAD27830.1| 387|Homo sapiens sorting nexin 7 protein. 43 0.001
AK223229-1|BAD96949.1| 387|Homo sapiens sorting nexin 7 isoform... 42 0.002
AK222968-1|BAD96688.1| 519|Homo sapiens sorting nexin 2 variant... 40 0.006
AL121585-4|CAI14859.1| 228|Homo sapiens sorting nexin 5 protein. 38 0.033
BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein. 38 0.043
BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein. 38 0.043
BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein. 38 0.043
AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein. 38 0.043
AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant... 38 0.043
AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens ... 38 0.043
AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein. 38 0.043
U83194-1|AAD24202.1| 410|Homo sapiens TRAF4-associated factor 2... 33 1.2
AF121856-1|AAD27829.1| 406|Homo sapiens sorting nexin 6 protein. 33 1.2
BC018762-1|AAH18762.1| 450|Homo sapiens sorting nexin 4 protein. 32 1.6
AF065485-1|AAC83149.1| 450|Homo sapiens sorting nexin 4 protein. 32 1.6
EF219141-1|ABN09670.1| 574|Homo sapiens sorting nexin 30 protein. 30 8.6
BC018775-1|AAH18775.1| 574|Homo sapiens SH3 and PX domain conta... 30 8.6
>BT007203-1|AAP35867.1| 172|Homo sapiens sorting nexin 12 protein.
Length = 172
Score = 164 bits (398), Expect = 3e-40
Identities = 76/97 (78%), Positives = 85/97 (87%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRLN K Q L DAY P+NFLEID+ NP T+GVG+ R+T YEVRMRTNLP+FK+K+S V
Sbjct: 10 RRLNSKPQDLTDAYGPPSNFLEIDIFNP-QTVGVGRARFTTYEVRMRTNLPIFKLKESCV 68
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWL+NELERDSKIVVPPLPGKALKRQLPFR
Sbjct: 69 RRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFR 105
>BC103848-1|AAI03849.1| 162|Homo sapiens sorting nexin 12 protein.
Length = 162
Score = 164 bits (398), Expect = 3e-40
Identities = 76/97 (78%), Positives = 85/97 (87%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRLN K Q L DAY P+NFLEID+ NP T+GVG+ R+T YEVRMRTNLP+FK+K+S V
Sbjct: 10 RRLNSKPQDLTDAYGPPSNFLEIDIFNP-QTVGVGRARFTTYEVRMRTNLPIFKLKESCV 68
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWL+NELERDSKIVVPPLPGKALKRQLPFR
Sbjct: 69 RRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFR 105
>BC103847-1|AAI03848.1| 162|Homo sapiens sorting nexin 12 protein.
Length = 162
Score = 164 bits (398), Expect = 3e-40
Identities = 76/97 (78%), Positives = 85/97 (87%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRLN K Q L DAY P+NFLEID+ NP T+GVG+ R+T YEVRMRTNLP+FK+K+S V
Sbjct: 10 RRLNSKPQDLTDAYGPPSNFLEIDIFNP-QTVGVGRARFTTYEVRMRTNLPIFKLKESCV 68
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWL+NELERDSKIVVPPLPGKALKRQLPFR
Sbjct: 69 RRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFR 105
>AF171229-1|AAD48491.1| 162|Homo sapiens sorting nexin 12 protein.
Length = 162
Score = 162 bits (394), Expect = 9e-40
Identities = 75/97 (77%), Positives = 85/97 (87%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRLN K Q L DAY P+NFLEID+ NP T+GVG+ R+T YEVRMRTNLP+FK+K+S V
Sbjct: 10 RRLNSKPQDLTDAYGPPSNFLEIDIFNP-QTVGVGRARFTTYEVRMRTNLPIFKLKESCV 68
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWL+NELERDSKIVVPPLPGKALKR+LPFR
Sbjct: 69 RRRYSDFEWLKNELERDSKIVVPPLPGKALKRKLPFR 105
>Z98742-5|CAI95646.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>CR456898-1|CAG33179.1| 162|Homo sapiens SNX3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>BT007114-1|AAP35778.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>BC015179-1|AAH15179.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>BC014580-1|AAH14580.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>BC008444-1|AAH08444.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>AL078596-4|CAI20819.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>AF034546-1|AAC16040.1| 162|Homo sapiens sorting nexin 3 protein.
Length = 162
Score = 152 bits (368), Expect = 1e-36
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 104
>AF062483-1|AAC16018.1| 162|Homo sapiens SDP3 protein.
Length = 162
Score = 148 bits (359), Expect = 2e-35
Identities = 67/97 (69%), Positives = 82/97 (84%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA R PFR
Sbjct: 68 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRHFPFR 104
>BC016863-1|AAH16863.1| 113|Homo sapiens SNX3 protein protein.
Length = 113
Score = 119 bits (287), Expect = 8e-27
Identities = 54/79 (68%), Positives = 68/79 (86%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKTNLPIFKLKESTV 67
Query: 300 RRRYSDFEWLRNELERDSK 356
RRRYSDFEWLR+ELER+SK
Sbjct: 68 RRRYSDFEWLRSELERESK 86
>Z98742-6|CAI95647.1| 140|Homo sapiens sorting nexin 3 protein.
Length = 140
Score = 105 bits (253), Expect = 1e-22
Identities = 57/97 (58%), Positives = 66/97 (68%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEID TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEID-----------------------TNLPIFKLKESTV 45
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 46 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 82
>AL078596-5|CAI20817.1| 140|Homo sapiens sorting nexin 3 protein.
Length = 140
Score = 105 bits (253), Expect = 1e-22
Identities = 57/97 (58%), Positives = 66/97 (68%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
RRL K Q L+DAY P+NFLEID TNLP+FK+K+S+V
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEID-----------------------TNLPIFKLKESTV 45
Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
RRRYSDFEWLR+ELER+SK+VVPPLPGKA RQLPFR
Sbjct: 46 RRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFR 82
>Z98742-7|CAI95648.1| 130|Homo sapiens sorting nexin 3 protein.
Length = 130
Score = 62.5 bits (145), Expect(2) = 4e-15
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLP 272
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++ +P
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKVVVP 58
Score = 38.7 bits (86), Expect(2) = 4e-15
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 354 KIVVPPLPGKALKRQLPFR 410
K+VVPPLPGKA RQLPFR
Sbjct: 54 KVVVPPLPGKAFLRQLPFR 72
>AL078596-6|CAI20818.1| 130|Homo sapiens sorting nexin 3 protein.
Length = 130
Score = 62.5 bits (145), Expect(2) = 4e-15
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLP 272
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++ +P
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKVVVP 58
Score = 38.7 bits (86), Expect(2) = 4e-15
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 354 KIVVPPLPGKALKRQLPFR 410
K+VVPPLPGKA RQLPFR
Sbjct: 54 KVVVPPLPGKAFLRQLPFR 72
>AB047360-1|BAB32649.1| 130|Homo sapiens sorting nexin 3A protein.
Length = 130
Score = 62.5 bits (145), Expect(2) = 4e-15
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = +3
Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLP 272
RRL K Q L+DAY P+NFLEIDV NP T+GVG+ R+T YE+R++ +P
Sbjct: 9 RRLITKPQNLNDAYGPPSNFLEIDVSNP-QTVGVGRGRFTTYEIRVKVVVP 58
Score = 38.7 bits (86), Expect(2) = 4e-15
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 354 KIVVPPLPGKALKRQLPFR 410
K+VVPPLPGKA RQLPFR
Sbjct: 54 KVVVPPLPGKAFLRQLPFR 72
>BT006723-1|AAP35369.1| 270|Homo sapiens sorting nexin 11 protein.
Length = 270
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKA 386
Y DY++ + TN F K S VRRRY +F WLR +L+R++ +V VP LPGK+
Sbjct: 35 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS 86
>BC103721-1|AAI03722.1| 270|Homo sapiens sorting nexin 11 protein.
Length = 270
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKA 386
Y DY++ + TN F K S VRRRY +F WLR +L+R++ +V VP LPGK+
Sbjct: 35 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS 86
>BC000768-1|AAH00768.1| 270|Homo sapiens sorting nexin 11 protein.
Length = 270
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKA 386
Y DY++ + TN F K S VRRRY +F WLR +L+R++ +V VP LPGK+
Sbjct: 35 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS 86
>AK023932-1|BAB14732.1| 270|Homo sapiens protein ( Homo sapiens
cDNA FLJ13870 fis, clone THYRO1001313, highly similar to
Homo sapiens sorting nexin 11 (SNX11) mRNA. ).
Length = 270
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKA 386
Y DY++ + TN F K S VRRRY +F WLR +L+R++ +V VP LPGK+
Sbjct: 35 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS 86
>AF121861-1|AAD27834.1| 264|Homo sapiens sorting nexin 11 protein.
Length = 264
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKA 386
Y DY++ + TN F K S VRRRY +F WLR +L+R++ +V VP LPGK+
Sbjct: 29 YVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKS 80
>BC034992-1|AAH34992.1| 201|Homo sapiens sorting nexin 10 protein.
Length = 201
Score = 52.4 bits (120), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKAL 389
Y DYE+ + TN F +K S VRRRY +F WLR L+ ++ +V +P LP K L
Sbjct: 29 YIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNL 81
>BC031050-1|AAH31050.1| 201|Homo sapiens sorting nexin 10 protein.
Length = 201
Score = 52.4 bits (120), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKAL 389
Y DYE+ + TN F +K S VRRRY +F WLR L+ ++ +V +P LP K L
Sbjct: 29 YIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNL 81
>AF121860-1|AAD27833.1| 201|Homo sapiens sorting nexin 10 protein.
Length = 201
Score = 52.4 bits (120), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKAL 389
Y DYE+ + TN F +K S VRRRY +F WLR L+ ++ +V +P LP K L
Sbjct: 29 YIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNL 81
>AC074295-1|AAS07476.1| 103|Homo sapiens unknown protein.
Length = 103
Score = 52.4 bits (120), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIV-VPPLPGKAL 389
Y DYE+ + TN F +K S VRRRY +F WLR L+ ++ +V +P LP K L
Sbjct: 29 YIDYEICIHTNSMCFTMKTSCVRRRYREFVWLRQRLQSNALLVQLPELPSKNL 81
>AF065483-1|AAC17182.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 49.2 bits (112), Expect = 1e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPSPEKSL 216
>U53225-1|AAA98672.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPPPEKSL 216
>BT006983-1|AAP35629.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPPPEKSL 216
>BC000357-1|AAH00357.1| 522|Homo sapiens sorting nexin 1 protein.
Length = 522
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPPPEKSL 216
>AK222793-1|BAD96513.1| 522|Homo sapiens sorting nexin 1 isoform a
variant protein.
Length = 522
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPPPEKSL 216
>AK222561-1|BAD96281.1| 522|Homo sapiens sorting nexin 1 isoform a
variant protein.
Length = 522
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLPEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPPPEKSL 216
>AK128179-1|BAC87312.1| 557|Homo sapiens protein ( Homo sapiens
cDNA FLJ46302 fis, clone TESTI4036048, highly similar
to Sorting nexin 1. ).
Length = 557
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 145 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 203
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 204 NGFIVPPPPEKSL 216
>AB209013-1|BAD92250.1| 432|Homo sapiens sorting nexin 1 isoform a
variant protein.
Length = 432
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK 356
L + + +P +G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+
Sbjct: 55 LTVGITDP-EKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQ 113
Query: 357 --IVVPPLPGKAL 389
+VPP P K+L
Sbjct: 114 NGFIVPPPPEKSL 126
>AL390067-5|CAH71937.1| 437|Homo sapiens sorting nexin family
member 30 protein.
Length = 437
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKI-VVPPLPGK 383
Y Y + ++ F + + SVRRRY DF+WLR++LE ++PPLP K
Sbjct: 108 YITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEK 158
>AL360235-2|CAI41353.1| 437|Homo sapiens sorting nexin family
member 30 protein.
Length = 437
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKI-VVPPLPGK 383
Y Y + ++ F + + SVRRRY DF+WLR++LE ++PPLP K
Sbjct: 108 YITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEK 158
>AL139041-3|CAI95198.1| 437|Homo sapiens sorting nexin family
member 30 protein.
Length = 437
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKI-VVPPLPGK 383
Y Y + ++ F + + SVRRRY DF+WLR++LE ++PPLP K
Sbjct: 108 YITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEK 158
>AF065484-1|AAC17183.1| 457|Homo sapiens sorting nexin 1A protein.
Length = 457
Score = 48.0 bits (109), Expect = 3e-05
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Frame = +3
Query: 216 GVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDSK--IVVPPLPGKA 386
G G Y Y+V +T+LP+F+ K +V+RR+SDF L +L E+ S+ +VPP P K+
Sbjct: 91 GDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPSPEKS 150
Query: 387 L 389
L
Sbjct: 151 L 151
>BT009841-1|AAP88843.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER---D 350
+EI V +P +G G Y Y V +T+L +F + SV+RR+SDF L ++L
Sbjct: 142 IEIGVSDP-EKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLH 200
Query: 351 SKIVVPPLPGKAL 389
+VPP P K++
Sbjct: 201 VGYIVPPAPEKSI 213
>BC003382-1|AAH03382.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER---D 350
+EI V +P +G G Y Y V +T+L +F + SV+RR+SDF L ++L
Sbjct: 142 IEIGVSDP-EKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLH 200
Query: 351 SKIVVPPLPGKAL 389
+VPP P K++
Sbjct: 201 VGYIVPPAPEKSI 213
>AY272044-1|AAQ02693.1| 519|Homo sapiens transformation-related 9
protein.
Length = 519
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER---D 350
+EI V +P +G G Y Y V +T+L +F + SV+RR+SDF L ++L
Sbjct: 142 IEIGVSDP-EKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLH 200
Query: 351 SKIVVPPLPGKAL 389
+VPP P K++
Sbjct: 201 VGYIVPPAPEKSI 213
>AF065482-1|AAC17181.1| 519|Homo sapiens sorting nexin 2 protein.
Length = 519
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER---D 350
+EI V +P +G G Y Y V +T+L +F + SV+RR+SDF L ++L
Sbjct: 142 IEIGVSDP-EKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLH 200
Query: 351 SKIVVPPLPGKAL 389
+VPP P K++
Sbjct: 201 VGYIVPPAPEKSI 213
>BT006747-1|AAP35393.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>BC018105-1|AAH18105.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>BC010349-1|AAH10349.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>AL627442-2|CAH72125.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>AL627442-1|CAH72126.1| 336|Homo sapiens sorting nexin 7 protein.
Length = 336
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>AL049989-1|CAB43229.1| 420|Homo sapiens hypothetical protein
protein.
Length = 420
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 82 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 132
>AF121857-1|AAD27830.1| 387|Homo sapiens sorting nexin 7 protein.
Length = 387
Score = 42.7 bits (96), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T+ F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>AK223229-1|BAD96949.1| 387|Homo sapiens sorting nexin 7 isoform a
variant protein.
Length = 387
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 234 YTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER-DSKIVVPPLPGK 383
+ Y + +T F + VRRRY DF WL+ +LE +++PPLP K
Sbjct: 49 FITYRIITKTTRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEK 99
>AK222968-1|BAD96688.1| 519|Homo sapiens sorting nexin 2 variant
protein.
Length = 519
Score = 40.3 bits (90), Expect = 0.006
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 180 LEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELER---D 350
+EI V +P +G G Y Y V +T+L +F + SV+RR+SDF L ++L
Sbjct: 142 IEIGVSDP-EKVGDGMNAYMAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLH 200
Query: 351 SKIVVPPLPGKAL 389
+VPP K++
Sbjct: 201 VGYIVPPAAEKSI 213
>AL121585-4|CAI14859.1| 228|Homo sapiens sorting nexin 5 protein.
Length = 228
Score = 37.9 bits (84), Expect = 0.033
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 246 EVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
E R +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 13 EDRSKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 61
>BC093980-1|AAH93980.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 96
>BC093623-1|AAH93623.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 96
>BC062638-1|AAH62638.1| 412|Homo sapiens SNX5 protein protein.
Length = 412
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 55 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 104
>AL121585-2|CAC00471.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 96
>AK223308-1|BAD97028.1| 404|Homo sapiens sorting nexin 5 variant
protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 96
>AK001793-1|BAA91914.1| 404|Homo sapiens protein ( Homo sapiens
cDNA FLJ10931 fis, clone OVARC1000564. ).
Length = 404
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 96
>AF121855-1|AAD27828.1| 404|Homo sapiens sorting nexin 5 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.043
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSK---IVVPPLPGK 383
+ V +T LP F+ + SV R++ DF WL + L + +++PP P K
Sbjct: 47 FTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLIETTDYAGLIIPPAPTK 96
>U83194-1|AAD24202.1| 410|Homo sapiens TRAF4-associated factor 2
protein.
Length = 410
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRN---ELERDSKIVVPPLP 377
+ V +++LP FK + SV R++ +F WL + E E + ++PP P
Sbjct: 52 FTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAP 99
>AF121856-1|AAD27829.1| 406|Homo sapiens sorting nexin 6 protein.
Length = 406
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 243 YEVRMRTNLPVFKVKDSSVRRRYSDFEWLRN---ELERDSKIVVPPLP 377
+ V +++LP FK + SV R++ +F WL + E E + ++PP P
Sbjct: 48 FTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAP 95
>BC018762-1|AAH18762.1| 450|Homo sapiens sorting nexin 4 protein.
Length = 450
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 225 KKRYTDYEVRMRT--NLPVFKVKDSSVRRRYSDFEWLRNE-LERDSKIVVPPLPGK 383
++ YT Y + R+ + V S+ RRYS+FE LR+ L IVVPPLP K
Sbjct: 77 QETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEK 132
>AF065485-1|AAC83149.1| 450|Homo sapiens sorting nexin 4 protein.
Length = 450
Score = 32.3 bits (70), Expect = 1.6
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +3
Query: 225 KKRYTDYEVRMRT--NLPVFKVKDSSVRRRYSDFEWLRNE-LERDSKIVVPPLPGK 383
++ YT Y + R+ + V S+ RRYS+FE LR+ L IVVPPLP K
Sbjct: 77 QETYTAYLIETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEK 132
>EF219141-1|ABN09670.1| 574|Homo sapiens sorting nexin 30 protein.
Length = 574
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 291 SSVRRRYSDFEWLRNE-LERDSKIVVPPLPGK 383
S V RRY F+WL N L + + I VP LP K
Sbjct: 261 SPVYRRYKHFDWLYNRLLHKFTVISVPHLPEK 292
>BC018775-1|AAH18775.1| 574|Homo sapiens SH3 and PX domain
containing 3 protein.
Length = 574
Score = 29.9 bits (64), Expect = 8.6
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 291 SSVRRRYSDFEWLRNE-LERDSKIVVPPLPGK 383
S V RRY F+WL N L + + I VP LP K
Sbjct: 261 SPVYRRYKHFDWLYNRLLHKFTVISVPHLPEK 292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,417,284
Number of Sequences: 237096
Number of extensions: 1771782
Number of successful extensions: 3138
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 3036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3121
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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