Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26i01
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071431-1|AAL49053.1|  167|Drosophila melanogaster RE52028p pro...   192   3e-49
AE014297-1555|AAF54838.1|  167|Drosophila melanogaster CG6359-PA...   192   3e-49
AE014297-1556|AAN13550.1|  110|Drosophila melanogaster CG6359-PB...   107   1e-23
AY069492-1|AAL39637.1|  449|Drosophila melanogaster LD22082p pro...    43   3e-04
AE014134-1435|AAF52625.2|  449|Drosophila melanogaster CG8282-PA...    43   3e-04
AY119129-1|AAM50989.1|  458|Drosophila melanogaster RE32163p pro...    41   0.002
AE014134-602|AAF51109.1|  458|Drosophila melanogaster CG2774-PA ...    41   0.002
AY069705-1|AAL39850.1|  565|Drosophila melanogaster LD47602p pro...    33   0.27 
AF223381-1|AAF34701.1|  565|Drosophila melanogaster sorting nexi...    33   0.27 
AE014296-1715|AAF50219.2|  565|Drosophila melanogaster CG6757-PA...    33   0.27 

>AY071431-1|AAL49053.1|  167|Drosophila melanogaster RE52028p
           protein.
          Length = 167

 Score =  192 bits (469), Expect = 3e-49
 Identities = 89/97 (91%), Positives = 93/97 (95%)
 Frame = +3

Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
           RRLNVKKQTLDDAYA PANFLEIDV+NP+TTM  GKKRYTDYEVRMRTNLPVFKVK+SSV
Sbjct: 13  RRLNVKKQTLDDAYAVPANFLEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSV 72

Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
           RRRYSDFEWLRNELERDSKIVVPPLPGKA KRQ+PFR
Sbjct: 73  RRRYSDFEWLRNELERDSKIVVPPLPGKAWKRQMPFR 109


>AE014297-1555|AAF54838.1|  167|Drosophila melanogaster CG6359-PA,
           isoform A protein.
          Length = 167

 Score =  192 bits (469), Expect = 3e-49
 Identities = 89/97 (91%), Positives = 93/97 (95%)
 Frame = +3

Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
           RRLNVKKQTLDDAYA PANFLEIDV+NP+TTM  GKKRYTDYEVRMRTNLPVFKVK+SSV
Sbjct: 13  RRLNVKKQTLDDAYAVPANFLEIDVVNPLTTMAAGKKRYTDYEVRMRTNLPVFKVKESSV 72

Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
           RRRYSDFEWLRNELERDSKIVVPPLPGKA KRQ+PFR
Sbjct: 73  RRRYSDFEWLRNELERDSKIVVPPLPGKAWKRQMPFR 109


>AE014297-1556|AAN13550.1|  110|Drosophila melanogaster CG6359-PB,
           isoform B protein.
          Length = 110

 Score =  107 bits (258), Expect = 1e-23
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = +3

Query: 255 MRTNLPVFKVKDSSVRRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
           MRTNLPVFKVK+SSVRRRYSDFEWLRNELERDSKIVVPPLPGKA KRQ+PFR
Sbjct: 1   MRTNLPVFKVKESSVRRRYSDFEWLRNELERDSKIVVPPLPGKAWKRQMPFR 52


>AY069492-1|AAL39637.1|  449|Drosophila melanogaster LD22082p
           protein.
          Length = 449

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
 Frame = +3

Query: 150 DDAYAAPAN--FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFE 323
           D + +APA    L  + L+   +  + +K    + V  RT LP F  KD++V R++ +F 
Sbjct: 57  DSSSSAPATPAVLGENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEEFV 116

Query: 324 WLRNELERD---SKIVVPPLP 377
           WL + +E +   +  ++PP P
Sbjct: 117 WLHDRIEENDDYAGYIIPPCP 137


>AE014134-1435|AAF52625.2|  449|Drosophila melanogaster CG8282-PA
           protein.
          Length = 449

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
 Frame = +3

Query: 150 DDAYAAPAN--FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFE 323
           D + +APA    L  + L+   +  + +K    + V  RT LP F  KD++V R++ +F 
Sbjct: 57  DSSSSAPATPAVLGENALHVEISDALSEKEKVKFTVHTRTTLPGFSKKDNNVVRQHEEFV 116

Query: 324 WLRNELERD---SKIVVPPLP 377
           WL + +E +   +  ++PP P
Sbjct: 117 WLHDRIEENDDYAGYIIPPCP 137


>AY119129-1|AAM50989.1|  458|Drosophila melanogaster RE32163p
           protein.
          Length = 458

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +3

Query: 177 FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDS 353
           F+ I V +P   +G G   Y  Y+V  +TN+P FK  + S  RR+SDF  + + L  +  
Sbjct: 74  FISIVVSDP-QKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYM 132

Query: 354 KI--VVPPLPGK 383
           ++  ++PP P K
Sbjct: 133 RLGRIIPPAPSK 144


>AE014134-602|AAF51109.1|  458|Drosophila melanogaster CG2774-PA
           protein.
          Length = 458

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = +3

Query: 177 FLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSVRRRYSDFEWLRNEL-ERDS 353
           F+ I V +P   +G G   Y  Y+V  +TN+P FK  + S  RR+SDF  + + L  +  
Sbjct: 74  FISIVVSDP-QKIGDGMGSYLAYKVTTKTNIPKFKRSEFSTLRRFSDFLGIHDLLVGKYM 132

Query: 354 KI--VVPPLPGK 383
           ++  ++PP P K
Sbjct: 133 RLGRIIPPAPSK 144


>AY069705-1|AAL39850.1|  565|Drosophila melanogaster LD47602p
           protein.
          Length = 565

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 294 SVRRRYSDFEWLRNEL-ERDSKIVVPPLPGKAL 389
           SV RRY  F+WL   L ++   I VPPLP K +
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI 283


>AF223381-1|AAF34701.1|  565|Drosophila melanogaster sorting nexin
           DSH3PX1 protein.
          Length = 565

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 294 SVRRRYSDFEWLRNEL-ERDSKIVVPPLPGKAL 389
           SV RRY  F+WL   L ++   I VPPLP K +
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI 283


>AE014296-1715|AAF50219.2|  565|Drosophila melanogaster CG6757-PA
           protein.
          Length = 565

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 294 SVRRRYSDFEWLRNEL-ERDSKIVVPPLPGKAL 389
           SV RRY  F+WL   L ++   I VPPLP K +
Sbjct: 251 SVSRRYKHFDWLHERLVDKFCLIPVPPLPDKQI 283


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,699,502
Number of Sequences: 53049
Number of extensions: 551886
Number of successful extensions: 1449
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)