Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26i01
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034364-3|CAA22253.1|  162|Caenorhabditis elegans Hypothetical ...   161   3e-40
AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical ...    34   0.081
AL023835-4|CAD56254.1|  564|Caenorhabditis elegans Hypothetical ...    31   0.75 
AL023835-3|CAD56253.1|  566|Caenorhabditis elegans Hypothetical ...    31   0.75 
AL023835-2|CAA19487.2|  592|Caenorhabditis elegans Hypothetical ...    31   0.75 
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    28   5.3  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    28   5.3  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    28   5.3  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       28   5.3  
Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U39997-2|AAK68388.1|  378|Caenorhabditis elegans Dehydrogenases,...    27   9.2  
U28741-5|AAO38644.1|  987|Caenorhabditis elegans Synapse defecti...    27   9.2  

>AL034364-3|CAA22253.1|  162|Caenorhabditis elegans Hypothetical
           protein W06D4.5 protein.
          Length = 162

 Score =  161 bits (392), Expect = 3e-40
 Identities = 75/97 (77%), Positives = 87/97 (89%)
 Frame = +3

Query: 120 RRLNVKKQTLDDAYAAPANFLEIDVLNPVTTMGVGKKRYTDYEVRMRTNLPVFKVKDSSV 299
           +R+  K+QTLD+AYA PANFLEI+V+NP+T  GVGK RYTDYE+RMR+NLPVFK K+SSV
Sbjct: 9   QRIPSKRQTLDEAYAPPANFLEIEVINPITH-GVGKMRYTDYEIRMRSNLPVFKQKESSV 67

Query: 300 RRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
           RRRYSDFEW+R ELERDSKIVVP LPGK+ KRQLPFR
Sbjct: 68  RRRYSDFEWVRAELERDSKIVVPTLPGKSFKRQLPFR 104


>AC024835-2|AAK68537.1|  684|Caenorhabditis elegans Hypothetical
           protein Y57E12B.3 protein.
          Length = 684

 Score = 34.3 bits (75), Expect = 0.081
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +3

Query: 288 DSSVRRRYSDFEWLRNELERDSKIVVPPLPGKALKRQLPFR 410
           +SS+   YSDF+WL N  + +   ++P LP K LK+    R
Sbjct: 578 NSSIYLFYSDFDWLANPKDVEG-FLIPMLPSKTLKKATKLR 617


>AL023835-4|CAD56254.1|  564|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2d protein.
          Length = 564

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 297 VRRRYSDFEWLRNELERDSKIV-VPPLPGK 383
           V RRY  F+WL  +L     ++ +PPLP K
Sbjct: 260 VSRRYKHFDWLHEQLSAKYVLIPIPPLPEK 289


>AL023835-3|CAD56253.1|  566|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2c protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 297 VRRRYSDFEWLRNELERDSKIV-VPPLPGK 383
           V RRY  F+WL  +L     ++ +PPLP K
Sbjct: 262 VSRRYKHFDWLHEQLSAKYVLIPIPPLPEK 291


>AL023835-2|CAA19487.2|  592|Caenorhabditis elegans Hypothetical
           protein Y37A1B.2b protein.
          Length = 592

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 297 VRRRYSDFEWLRNELERDSKIV-VPPLPGK 383
           V RRY  F+WL  +L     ++ +PPLP K
Sbjct: 288 VSRRYKHFDWLHEQLSAKYVLIPIPPLPEK 317


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1493 WKITIVNMEKRVVLPPLSDKALLKQLP 1519


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1832 WKITIVNMEKRVVLPPLSDKALLKQLP 1858


>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
            ZK524.2c protein.
          Length = 1475

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1152 WKITIVNMEKRVVLPPLSDKALLKQLP 1178


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1490 WKITIVNMEKRVVLPPLSDKALLKQLP 1516


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
            protein ZK524.2e protein.
          Length = 1816

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1493 WKITIVNMEKRVVLPPLSDKALLKQLP 1519


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
            protein ZK524.2d protein.
          Length = 2155

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1832 WKITIVNMEKRVVLPPLSDKALLKQLP 1858


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1490 WKITIVNMEKRVVLPPLSDKALLKQLP 1516


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1493 WKITIVNMEKRVVLPPLSDKALLKQLP 1519


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1832 WKITIVNMEKRVVLPPLSDKALLKQLP 1858


>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
            ZK524.2c protein.
          Length = 1475

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1152 WKITIVNMEKRVVLPPLSDKALLKQLP 1178


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1490 WKITIVNMEKRVVLPPLSDKALLKQLP 1516


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 324  WLRNELERDSKIVVPPLPGKALKRQLP 404
            W    +  + ++V+PPL  KAL +QLP
Sbjct: 1492 WKITIVNMEKRVVLPPLSDKALLKQLP 1518


>Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical
           protein C25F9.1 protein.
          Length = 431

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 659 NDIRFHSITFPQS*LEKMFVEKLHSQIRM*SRSQRMIHRQLIQWIGLVEHPRWEKVVDFV 480
           +DI+F +    +S L+K     LHS++      Q M+ + L++  GL E     +V D V
Sbjct: 262 SDIKFSTCLVEKSELKKKIDRLLHSRLEDRLNWQMMLAQNLLRDAGLDELKTEYEVEDLV 321

Query: 479 K 477
           K
Sbjct: 322 K 322


>U39997-2|AAK68388.1|  378|Caenorhabditis elegans Dehydrogenases,
           short chain protein5 protein.
          Length = 378

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 518 LNQSTELVACESYAVTYFTSGSENVVSPQTF 610
           +N  T + A  +  +TY+T GS  VV+P+ F
Sbjct: 259 INVQTLIPALVATKMTYYTKGSTFVVTPENF 289


>U28741-5|AAO38644.1|  987|Caenorhabditis elegans Synapse defective
           protein 1, isoforma protein.
          Length = 987

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 405 TATVSSELCRAREVRLSCCPSPIHS*ATRSRYTA 304
           T    +E C     RL CC SP+   A+RSR  A
Sbjct: 36  TEEPQNECCCCWLCRLLCCCSPVDQTASRSRMNA 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,099,095
Number of Sequences: 27780
Number of extensions: 276119
Number of successful extensions: 638
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)