Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26h21
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   9.0  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 148  FCVTNLIGMLKCCRVVETKRKGIKFH 225
            F +  ++     C  VETK K  KFH
Sbjct: 1703 FTMRPVVSCASGCTAVETKSKPYKFH 1728


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = +3

Query: 81  NCIKSDINTQ---SVLFIRVYIECCIL 152
           +C+K D+  +   S   I++YI CC+L
Sbjct: 229 SCLKVDLLFKREFSYYLIQIYIPCCML 255


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = +3

Query: 81  NCIKSDINTQ---SVLFIRVYIECCIL 152
           +C+K D+  +   S   I++YI CC+L
Sbjct: 229 SCLKVDLLFKREFSYYLIQIYIPCCML 255


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 474 HQCTQLKRIWITTGQMCLNSR 536
           H+CT   + +I +GQ+ ++ R
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMR 196


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 590 KNSHEALGLPLE-LQHLAFSTVQAHLSSCN 504
           ++  +A+   LE  Q L  + VQAHL +C+
Sbjct: 162 RSQEKAVAAELEDEQRLLATVVQAHLDTCD 191


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 600 KNDM*QWMKQSELDVMSTVQRRVLLTPYSNVGFCRG 707
           +ND   W+ +SE  ++ +V  R  LT    VG   G
Sbjct: 240 ENDKMSWLFESEDVLLPSVYLRWNLTSGERVGLVGG 275


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = +3

Query: 501 WITTGQMCLNSRKSKM 548
           W+  GQ+CL  +++++
Sbjct: 508 WVQKGQICLKEKENEI 523


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,282
Number of Sequences: 438
Number of extensions: 4157
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)