Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26h07
         (714 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075515-1|AAL68323.1|  670|Drosophila melanogaster RE65495p pro...    30   2.7  
AF091050-1|AAC71019.1|  672|Drosophila melanogaster Partner of N...    30   2.7  
AE014298-650|AAF45964.1|  670|Drosophila melanogaster CG3346-PA ...    30   2.7  
BT004481-1|AAO42645.1|  771|Drosophila melanogaster LD34250p pro...    30   3.6  
AE014298-1948|AAF48305.1|  789|Drosophila melanogaster CG9941-PA...    30   3.6  
X06870-1|CAA29994.1|  462|Drosophila melanogaster EF-1-alpha pro...    29   4.7  

>AY075515-1|AAL68323.1|  670|Drosophila melanogaster RE65495p
           protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 22/87 (25%), Positives = 39/87 (44%)
 Frame = -2

Query: 599 KRIPILLSLGKIVRSSLGKRVAFPSMYLSSHFASLPKISSIIFSHLTQPFSSALNLDKAT 420
           +++P  L +G     +LG R+ F  M L+    S      ++FS +  P  S   + + +
Sbjct: 216 EQLPTSLKIGLPFTPTLGCRIDFHGMSLTQLTPSKLLAEKLVFSPVPAPKRSLGAISEES 275

Query: 419 SLDLSLALLKTCASLESSCTIGLLGPN 339
           S+D+   L +    LE+S     L  N
Sbjct: 276 SMDIGKELDRYQLELENSINEAKLRKN 302


>AF091050-1|AAC71019.1|  672|Drosophila melanogaster Partner of Numb
           protein.
          Length = 672

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 22/87 (25%), Positives = 39/87 (44%)
 Frame = -2

Query: 599 KRIPILLSLGKIVRSSLGKRVAFPSMYLSSHFASLPKISSIIFSHLTQPFSSALNLDKAT 420
           +++P  L +G     +LG R+ F  M L+    S      ++FS +  P  S   + + +
Sbjct: 218 EQLPTSLKIGLPFTPTLGCRIDFHGMSLTQLTPSKLLAEKLVFSPVPAPKRSLGAISEES 277

Query: 419 SLDLSLALLKTCASLESSCTIGLLGPN 339
           S+D+   L +    LE+S     L  N
Sbjct: 278 SMDIGKELDRYQLELENSINEAKLRKN 304


>AE014298-650|AAF45964.1|  670|Drosophila melanogaster CG3346-PA
           protein.
          Length = 670

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 22/87 (25%), Positives = 39/87 (44%)
 Frame = -2

Query: 599 KRIPILLSLGKIVRSSLGKRVAFPSMYLSSHFASLPKISSIIFSHLTQPFSSALNLDKAT 420
           +++P  L +G     +LG R+ F  M L+    S      ++FS +  P  S   + + +
Sbjct: 216 EQLPTSLKIGLPFTPTLGCRIDFHGMSLTQLTPSKLLAEKLVFSPVPAPKRSLGAISEES 275

Query: 419 SLDLSLALLKTCASLESSCTIGLLGPN 339
           S+D+   L +    LE+S     L  N
Sbjct: 276 SMDIGKELDRYQLELENSINEAKLRKN 302


>BT004481-1|AAO42645.1|  771|Drosophila melanogaster LD34250p
           protein.
          Length = 771

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 613 AKNVGEK-LKEAAICLAVNDKSRQKSSLGDG 702
           +KNV  K LK+   CL  +D    KSS GDG
Sbjct: 548 SKNVSSKSLKQVVACLEADDDVDNKSSTGDG 578


>AE014298-1948|AAF48305.1|  789|Drosophila melanogaster CG9941-PA
           protein.
          Length = 789

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 613 AKNVGEK-LKEAAICLAVNDKSRQKSSLGDG 702
           +KNV  K LK+   CL  +D    KSS GDG
Sbjct: 566 SKNVSSKSLKQVVACLEADDDVDNKSSTGDG 596


>X06870-1|CAA29994.1|  462|Drosophila melanogaster EF-1-alpha
           protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 22/80 (27%), Positives = 37/80 (46%)
 Frame = +1

Query: 142 WTAAVRTVNKANPAAFLFRTSLADCNTHGKIAKSIAILQSKLQKSTKSGSEDEAKCAKCK 321
           +TA V  +N     A  + T + DC+T   IA   + ++ K  + T   +ED  K  K  
Sbjct: 340 FTAQVIVLNHPGQIANGY-TPVLDCHT-AHIACKFSEIKEKYDRRTGGTTEDGPKAIKSG 397

Query: 322 KIIDLVFGPNKPIVHEDSKD 381
               +V  P+KP+  E  ++
Sbjct: 398 DAAIIVLVPSKPLCVESFQE 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,144,625
Number of Sequences: 53049
Number of extensions: 625115
Number of successful extensions: 1854
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)