Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26g23
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 30 0.67
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 30 0.67
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 28 2.0
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 28 2.0
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 28 2.0
AL110478-1|CAB54340.2| 537|Caenorhabditis elegans Hypothetical ... 28 2.7
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 27 3.6
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 27 3.6
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 27 3.6
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 26 8.2
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.9 bits (64), Expect = 0.67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 232 HRTFHSFSFPNKISTMDSVSGKQETSHKPQDSL 330
H T S SFPN +++ S+ + H+P SL
Sbjct: 715 HSTHISVSFPNTVTSASSILSNSSSPHQPTPSL 747
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.9 bits (64), Expect = 0.67
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 232 HRTFHSFSFPNKISTMDSVSGKQETSHKPQDSL 330
H T S SFPN +++ S+ + H+P SL
Sbjct: 715 HSTHISVSFPNTVTSASSILSNSSSPHQPTPSL 747
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 184 PVFTKIARTEEYSISHTYREGQNANFRFFFILHKKYILSR*VTQQKNTLYTL 29
PVF + R +YS +++ REG + +H + R +QQ+ T+ TL
Sbjct: 1480 PVFQEDERNVKYSTNYSTREGGGLFELYIGRIHSADLAERKSSQQRCTVSTL 1531
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 184 PVFTKIARTEEYSISHTYREGQNANFRFFFILHKKYILSR*VTQQKNTLYTL 29
PVF + R +YS +++ REG + +H + R +QQ+ T+ TL
Sbjct: 1480 PVFQEDERNVKYSTNYSTREGGGLFELYIGRIHSADLAERKSSQQRCTVSTL 1531
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 184 PVFTKIARTEEYSISHTYREGQNANFRFFFILHKKYILSR*VTQQKNTLYTL 29
PVF + R +YS +++ REG + +H + R +QQ+ T+ TL
Sbjct: 1480 PVFQEDERNVKYSTNYSTREGGGLFELYIGRIHSADLAERKSSQQRCTVSTL 1531
>AL110478-1|CAB54340.2| 537|Caenorhabditis elegans Hypothetical
protein Y26D4A.2 protein.
Length = 537
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -2
Query: 139 HTYREGQNANFRFFFILHKKYILSR*VTQQKNTLYTLPTCYLPQV 5
H ++ NANF K Y+++ V ++ + ++P C +P V
Sbjct: 277 HRLKQAWNANFYNVKTTDKYYVVNTYVNEEATLVRSIPGCQMPFV 321
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -2
Query: 346 NFQLFAVNLVACVKFLVCHLLNP*Y*FCLEKRRNGMFDENRRIIE*LQ*SKNFVPVFTKI 167
N+Q A + + F +C+LLN K ++D+ R +E + K FVP+ KI
Sbjct: 70 NYQKAAPLIYVTLFFWICYLLNL---IVGTKTFRAVYDDVGRKLEEITEQKKFVPLSLKI 126
Query: 166 A 164
A
Sbjct: 127 A 127
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -2
Query: 346 NFQLFAVNLVACVKFLVCHLLNP*Y*FCLEKRRNGMFDENRRIIE*LQ*SKNFVPVFTKI 167
N+Q A + + F +C+LLN K ++D+ R +E + K FVP+ KI
Sbjct: 70 NYQKAAPLIYVTLFFWICYLLNL---IVGTKTFRAVYDDVGRKLEEITEQKKFVPLSLKI 126
Query: 166 A 164
A
Sbjct: 127 A 127
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -2
Query: 346 NFQLFAVNLVACVKFLVCHLLNP*Y*FCLEKRRNGMFDENRRIIE*LQ*SKNFVPVFTKI 167
N+Q A + + F +C+LLN K ++D+ R +E + K FVP+ KI
Sbjct: 70 NYQKAAPLIYVTLFFWICYLLNL---IVGTKTFRAVYDDVGRKLEEITEQKKFVPLSLKI 126
Query: 166 A 164
A
Sbjct: 127 A 127
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 26.2 bits (55), Expect = 8.2
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 382 QMASQNLHCLADNFQLFAVNLVACVKFLVCHLLNP*Y*FCLEKRRNGMFDENRRIIE 212
Q AS LHCL+ QL N A +K V CLE GM +E+ R++E
Sbjct: 772 QPASHQLHCLSRALQLNKANDSAWLKVAV---------LCLEM---GMINESSRVLE 816
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,715,642
Number of Sequences: 27780
Number of extensions: 198367
Number of successful extensions: 511
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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