Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26g21
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    23   4.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   7.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   7.0  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   7.0  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   7.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   7.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.0  

>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 472 YFCAYKGIKKT 440
           YFC +KG+K T
Sbjct: 188 YFCIWKGVKTT 198


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 730 IDILVTSFNHYEIWYDNIL*QICVL 656
           +D++ T  N  ++WY   L Q+ +L
Sbjct: 583 VDVIPTDKNPVQLWYVPSLDQVWIL 607


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 736 LSIDILVTSFNHYEIWYDN 680
           +++D L+T F+H+E   +N
Sbjct: 453 VTVDKLITYFDHFESMLNN 471


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 727 DILVTSFNHYEIWYDNIL 674
           DIL+T   H E+ ++NIL
Sbjct: 250 DILLTVRPHLELTFENIL 267


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 736 LSIDILVTSFNHYEIWYDN 680
           +++D L+T F+H+E   +N
Sbjct: 453 VTVDKLITYFDHFESMLNN 471


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 472 YFCAYKGIKKT 440
           YFC +KG+K T
Sbjct: 221 YFCIWKGVKWT 231


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 472 YFCAYKGIKKT 440
           YFC +KG+K T
Sbjct: 274 YFCIWKGVKWT 284


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 736 LSIDILVTSFNHYEIWYDN 680
           +++D L+T F+H+E   +N
Sbjct: 79  VTVDKLITYFDHFESMLNN 97


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 727 DILVTSFNHYEIWYDNIL 674
           DIL+T   H E+ ++NIL
Sbjct: 250 DILLTVRPHLELTFENIL 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,408
Number of Sequences: 438
Number of extensions: 3892
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)