Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte26g19
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132969-1|AAD27744.1| 198|Homo sapiens CGI-35 protein protein. 187 4e-47
BC080600-1|AAH80600.1| 109|Homo sapiens FCF1 protein protein. 68 3e-11
BC022441-1|AAH22441.1| 249|Homo sapiens chromosome 8 open readi... 39 0.018
BC005955-1|AAH05955.1| 249|Homo sapiens chromosome 8 open readi... 39 0.018
AK055279-1|BAB70896.1| 145|Homo sapiens protein ( Homo sapiens ... 39 0.018
BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processi... 34 0.39
AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated ... 34 0.39
AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens ... 34 0.39
AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined b... 34 0.52
Z97630-1|CAB42829.1| 194|Homo sapiens H1 histone family, member... 30 8.5
X03473-1|CAA27190.1| 194|Homo sapiens protein ( Human gene for ... 30 8.5
CR542220-1|CAG47016.1| 194|Homo sapiens H1F0 protein. 30 8.5
CR456502-1|CAG30388.1| 194|Homo sapiens H1F0 protein. 30 8.5
BC029046-1|AAH29046.1| 194|Homo sapiens H1 histone family, memb... 30 8.5
BC000145-1|AAH00145.1| 194|Homo sapiens H1 histone family, memb... 30 8.5
>AF132969-1|AAD27744.1| 198|Homo sapiens CGI-35 protein protein.
Length = 198
Score = 187 bits (455), Expect = 4e-47
Identities = 86/128 (67%), Positives = 104/128 (81%)
Frame = +2
Query: 278 MGKQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSAL 457
MGKQ+KTRK +A MK+M++ D R+K +R +PKKK+ DP +K REVPQ S L
Sbjct: 1 MGKQKKTRK-----YATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCL 55
Query: 458 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 637
FFQYN QLGPPYH+L+DTNFINFSIK KLD++Q+MMDCLYAKCIP ITDCV+ E+EKLG+
Sbjct: 56 FFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQ 115
Query: 638 KYRVALRI 661
KYRVALRI
Sbjct: 116 KYRVALRI 123
>BC080600-1|AAH80600.1| 109|Homo sapiens FCF1 protein protein.
Length = 109
Score = 68.1 bits (159), Expect = 3e-11
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +2
Query: 560 MMDCLYAKCIPYITDCVLGELEKLGRKYRVALRI 661
MMDCLYAKCIP ITDCV+ E+EKLG+KYRVALRI
Sbjct: 1 MMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRI 34
>BC022441-1|AAH22441.1| 249|Homo sapiens chromosome 8 open reading
frame 53 protein.
Length = 249
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 458 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 637
FF+ N + PY +L+D F +++ ++ + + + L + T CVL ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
>BC005955-1|AAH05955.1| 249|Homo sapiens chromosome 8 open reading
frame 53 protein.
Length = 249
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 458 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 637
FF+ N + PY +L+D F +++ ++ + + + L + T CVL ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
>AK055279-1|BAB70896.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ30717 fis, clone FCBBF2001672. ).
Length = 145
Score = 38.7 bits (86), Expect = 0.018
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 458 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 637
FF+ N + PY +L+D F +++ ++ + + + L + T CVL ELE LG+
Sbjct: 15 FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74
>BC117389-1|AAI17390.1| 499|Homo sapiens PRP31 pre-mRNA processing
factor 31 homolog (S. cerevisiae) protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 416 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 592
++KI E + + + A ++ P Y V++D N + I+N+L+II + Y+K P
Sbjct: 64 MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123
Query: 593 YITDCVLGELE 625
+ V L+
Sbjct: 124 ELESLVPNALD 134
>AY040822-1|AAK77986.1| 499|Homo sapiens U4/U6 snRNP-associated 61
kDa protein protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 416 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 592
++KI E + + + A ++ P Y V++D N + I+N+L+II + Y+K P
Sbjct: 64 MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123
Query: 593 YITDCVLGELE 625
+ V L+
Sbjct: 124 ELESLVPNALD 134
>AK098547-1|BAC05329.1| 364|Homo sapiens protein ( Homo sapiens
cDNA FLJ25681 fis, clone TST04131. ).
Length = 364
Score = 34.3 bits (75), Expect = 0.39
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 416 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 592
++KI E + + + A ++ P Y V++D N + I+N+L+II + Y+K P
Sbjct: 64 MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123
Query: 593 YITDCVLGELE 625
+ V L+
Sbjct: 124 ELESLVPNALD 134
>AF308303-1|AAG48270.1| 278|Homo sapiens serologically defined
breast cancer antigen NY-BR-99 protein.
Length = 278
Score = 33.9 bits (74), Expect = 0.52
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 473 MQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELE 625
++ P Y V++D N + I+N+L+II + Y+K P + V L+
Sbjct: 4 VEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALD 54
>Z97630-1|CAB42829.1| 194|Homo sapiens H1 histone family, member 0
protein.
Length = 194
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 284 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDP 412
K +K +K A KK P + K + S+PKK KPV P
Sbjct: 139 KATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKP 181
>X03473-1|CAA27190.1| 194|Homo sapiens protein ( Human gene for
histone H1(0). ).
Length = 194
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 284 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDP 412
K +K +K A KK P + K + S+PKK KPV P
Sbjct: 139 KATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKP 181
>CR542220-1|CAG47016.1| 194|Homo sapiens H1F0 protein.
Length = 194
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 284 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDP 412
K +K +K A KK P + K + S+PKK KPV P
Sbjct: 139 KATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKP 181
>CR456502-1|CAG30388.1| 194|Homo sapiens H1F0 protein.
Length = 194
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 284 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDP 412
K +K +K A KK P + K + S+PKK KPV P
Sbjct: 139 KATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKP 181
>BC029046-1|AAH29046.1| 194|Homo sapiens H1 histone family, member
0 protein.
Length = 194
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 284 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDP 412
K +K +K A KK P + K + S+PKK KPV P
Sbjct: 139 KATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKP 181
>BC000145-1|AAH00145.1| 194|Homo sapiens H1 histone family, member
0 protein.
Length = 194
Score = 29.9 bits (64), Expect = 8.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 284 KQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSEPKKKKPVDP 412
K +K +K A KK P + K + S+PKK KPV P
Sbjct: 139 KATPVKKAKKKLAATPKKAKKPKTVKAKPVKASKPKKAKPVKP 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,757,155
Number of Sequences: 237096
Number of extensions: 1890994
Number of successful extensions: 3635
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3634
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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