Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26g19
         (663 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   0.64 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    24   1.1  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   1.5  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   3.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.0  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   6.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   6.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.9  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 254 IPKTLTSILIDTNRYSNDK--PYEQY 183
           IP TLT I +DTNR  + K  PY  +
Sbjct: 90  IPATLTYISLDTNRGGSPKLTPYPNW 115


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 312 STIFLVFRCLPIIMIYKYLYSKNLNFYFN*HKPIQ 208
           +TIF    C+P+I+I  Y YS+ ++   N  K ++
Sbjct: 213 ATIFTFSYCIPMILII-YYYSQIVSHVVNHEKALR 246


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +1

Query: 226 IKIEVKVFGIQIFINHYNGQTTKNEENSREKICKNEKNDQPQRLSD 363
           +K  V +FG  + +     +  K   ++ + +CK E     Q+ +D
Sbjct: 1   MKTIVLIFGFCVCVGALTIEELKTRLHTEQSVCKTETGIDQQKAND 46


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 265 INHYNGQTTKNEENSREKICKNEKNDQPQRL 357
           +   N  TT NEE  RE+  K + ++Q  RL
Sbjct: 70  VGFVNADTTFNEEKFRERTTKLD-SEQVNRL 99


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 500 LIDTNFINFSIKNKLDIIQNMMD 568
           ++D N  NF+ KN  DI+Q ++D
Sbjct: 72  VVDENG-NFNEKNTRDIVQAVLD 93


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 389 KKKKPVDPHVIKIREVPQT 445
           +K  P+ PH   +  +PQT
Sbjct: 99  RKLPPLHPHTAMVTHLPQT 117


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -3

Query: 415 MRIYRFLLLWFTPFAI 368
           M++   +++W++PF I
Sbjct: 276 MKLVGIIIMWYSPFGI 291


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/39 (23%), Positives = 24/39 (61%)
 Frame = +2

Query: 269 IIIMGKQRKTRKIVEKRFAKMKKMINPSDSRIKNSERSE 385
           +I++G+Q + +  + +R  K+K  I  ++  + ++ER +
Sbjct: 422 VILVGEQARAQDGLRRRMDKLKSSIEEANLAV-SAEREK 459


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,441
Number of Sequences: 438
Number of extensions: 4666
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)