Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26g07
         (763 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.58 
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.1  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 202 HLTGVVKHWSSFRRASIKQQ 261
           HL+G   HW S RR S  Q+
Sbjct: 262 HLSGGTNHWDSGRRKSAAQR 281


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 17/68 (25%), Positives = 27/68 (39%)
 Frame = +1

Query: 238 RRASIKQQGKATAGSISAATKI*RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNG 417
           RRA I++  + T        K  R +S    N DA     +  VK+  + +       + 
Sbjct: 172 RRAQIRRNERRTPDPHDETAKKPRVLSPPLNNNDATPTDFSMGVKNNHVSSKVEGNGVHE 231

Query: 418 TSSKSEDN 441
            +S  EDN
Sbjct: 232 ENSPLEDN 239



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 125 SDFTN*NHDEHFVKITLQSSKRYDSRISRVLSNIGAHFAAPVSSS 259
           S F N   DE FV +TL    R       VLS    +F   + S+
Sbjct: 20  SAFENLRDDEDFVDVTLACDGRSLKAHRVVLSACSPYFRELLKST 64


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 682 LDEIKKKLTTCGQPGITSHVTKS 750
           +D I  KLT   QPG+T+ +  S
Sbjct: 641 MDAICTKLTADCQPGVTAFIVTS 663


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 307 RKMSTEAQNTDAAVEQ-VTQEVKDVKLENGNAP 402
           RK+  E + TD  + Q + ++V D +L NG  P
Sbjct: 382 RKLDEEMKRTDELLYQMIPKQVAD-RLRNGENP 413


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,175
Number of Sequences: 438
Number of extensions: 3826
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)