Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f23
         (385 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11900-1|CAA72641.1|  217|Drosophila melanogaster dnaJ-like prot...    28   3.6  
BT016076-1|AAV36961.1|  230|Drosophila melanogaster LP03951p pro...    28   3.6  
AY070567-1|AAL48038.2|  230|Drosophila melanogaster LP04971p pro...    28   3.6  
AE013599-3830|AAF47174.1|  217|Drosophila melanogaster CG12240-P...    28   3.6  
AE013599-3829|AAF47173.2|  317|Drosophila melanogaster CG12240-P...    28   3.6  

>Y11900-1|CAA72641.1|  217|Drosophila melanogaster dnaJ-like protein
           protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 101 KSHYELLS---SCTKRISRTRKTLCSTFYQYQIQTQSA-KGSLARLM----ALKPLIKTE 256
           ++HYE+L+    C+ R  R      S  Y   +++ +A     AR +    A K LIK E
Sbjct: 25  ETHYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPE 84

Query: 257 KRRDLTD 277
           +RRD  D
Sbjct: 85  RRRDYDD 91


>BT016076-1|AAV36961.1|  230|Drosophila melanogaster LP03951p
           protein.
          Length = 230

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 101 KSHYELLS---SCTKRISRTRKTLCSTFYQYQIQTQSA-KGSLARLM----ALKPLIKTE 256
           ++HYE+L+    C+ R  R      S  Y   +++ +A     AR +    A K LIK E
Sbjct: 38  ETHYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPE 97

Query: 257 KRRDLTD 277
           +RRD  D
Sbjct: 98  RRRDYDD 104


>AY070567-1|AAL48038.2|  230|Drosophila melanogaster LP04971p
           protein.
          Length = 230

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 101 KSHYELLS---SCTKRISRTRKTLCSTFYQYQIQTQSA-KGSLARLM----ALKPLIKTE 256
           ++HYE+L+    C+ R  R      S  Y   +++ +A     AR +    A K LIK E
Sbjct: 38  ETHYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPE 97

Query: 257 KRRDLTD 277
           +RRD  D
Sbjct: 98  RRRDYDD 104


>AE013599-3830|AAF47174.1|  217|Drosophila melanogaster CG12240-PA,
           isoform A protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 101 KSHYELLS---SCTKRISRTRKTLCSTFYQYQIQTQSA-KGSLARLM----ALKPLIKTE 256
           ++HYE+L+    C+ R  R      S  Y   +++ +A     AR +    A K LIK E
Sbjct: 25  ETHYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPE 84

Query: 257 KRRDLTD 277
           +RRD  D
Sbjct: 85  RRRDYDD 91


>AE013599-3829|AAF47173.2|  317|Drosophila melanogaster CG12240-PB,
           isoform B protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 101 KSHYELLS---SCTKRISRTRKTLCSTFYQYQIQTQSA-KGSLARLM----ALKPLIKTE 256
           ++HYE+L+    C+ R  R      S  Y   +++ +A     AR +    A K LIK E
Sbjct: 25  ETHYEVLNIRNDCSTREVRNAFVQLSKLYHPDVKSNAACPERTARFVQISEAYKTLIKPE 84

Query: 257 KRRDLTD 277
           +RRD  D
Sbjct: 85  RRRDYDD 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,788,182
Number of Sequences: 53049
Number of extensions: 200580
Number of successful extensions: 479
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)