Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f15
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me...    29   4.1  
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me...    29   4.1  
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB...    29   4.1  
AY061624-1|AAL29172.1|  683|Drosophila melanogaster SD09866p pro...    29   7.2  
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    28   9.6  

>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
            D.melanogaster ninaCencoded long protein mRNA, complete
            cds. ).
          Length = 1501

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 359  NYGPSESFRPQGHARQPALRALAGNAGRSGQDENGR 466
            NYG S  F  Q   R P LR    + GRS +D N R
Sbjct: 1442 NYGVSRKFGQQ--QRAPTLRQSPASVGRSFEDSNAR 1475


>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
            D.melanogaster ninaCprotein genes, complete cds. ).
          Length = 1501

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 359  NYGPSESFRPQGHARQPALRALAGNAGRSGQDENGR 466
            NYG S  F  Q   R P LR    + GRS +D N R
Sbjct: 1442 NYGVSRKFGQQ--QRAPTLRQSPASVGRSFEDSNAR 1475


>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
            isoform B protein.
          Length = 1501

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 359  NYGPSESFRPQGHARQPALRALAGNAGRSGQDENGR 466
            NYG S  F  Q   R P LR    + GRS +D N R
Sbjct: 1442 NYGVSRKFGQQ--QRAPTLRQSPASVGRSFEDSNAR 1475


>AY061624-1|AAL29172.1|  683|Drosophila melanogaster SD09866p
           protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = -3

Query: 266 ERRCEHQRYDLPVNPHSVGQLQFPWQWNLILVRRQ*IHSSDSENSRGNFSYYKHIRVYGS 87
           E R  + R DL VN H        W W+L+        S   ++ RG   YY H ++   
Sbjct: 193 EHRLWYFREDLGVNLHH-------WHWHLVYPIEAPDRSIVDKDRRGELFYYMHQQIIAR 245

Query: 86  SGAP*LRYH 60
           + A  L  H
Sbjct: 246 NNAERLSNH 254


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 95   TPECACNKKSYPSSFR 142
            TPEC+CNKK   SS R
Sbjct: 1292 TPECSCNKKESSSSCR 1307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,577,531
Number of Sequences: 53049
Number of extensions: 636280
Number of successful extensions: 1373
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)