Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f15
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z77658-9|CAE17786.2|  201|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U97011-1|AAB52324.1|  174|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z73912-1|CAA98145.1|  465|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z14067-1|CAA78450.1|  465|Caenorhabditis elegans putative integr...    27   8.7  
Z14066-1|CAA78449.1|  465|Caenorhabditis elegans putative integr...    27   8.7  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +2

Query: 329  LNAQSRQYIQNYGPSESFRPQGHARQPALRALAGNAGRSGQDENGR 466
            +N Q +Q  Q  GP +SF   G   QP+    +G   + GQ + G+
Sbjct: 2792 MNMQQQQNRQQGGPQQSFSGPGGINQPSQPGYSGYNQQGGQGQQGQ 2837


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 365 GPSESFRPQGHARQPALRALAGNAGRSGQDENGREKISS 481
           GP    +PQ H++QPA +      G+SG   +G+E ++S
Sbjct: 568 GPPRQQQPQQHSQQPAQQPGQQGQGQSGIVIHGQETLTS 606


>Z77658-9|CAE17786.2|  201|Caenorhabditis elegans Hypothetical
           protein F14D7.9 protein.
          Length = 201

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/38 (34%), Positives = 25/38 (65%)
 Frame = +1

Query: 538 VYVFFCTSFLVIHIV**VTLDRLLNVFFIKTNYRSASF 651
           +YV +C++FL + ++  ++L+R L  FF+  N+ S  F
Sbjct: 114 LYVDYCSNFLSLSVIFFLSLNRCL--FFVAKNWNSLIF 149


>U97011-1|AAB52324.1|  174|Caenorhabditis elegans Hypothetical
           protein F31F7.3 protein.
          Length = 174

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +2

Query: 86  CFHTPECACNKKSYPSSFR--SQTNGSIASEP-V*DSIAKETEAD 211
           CF  P+C C+  S  +SF   S ++  + S P   +S  K  E D
Sbjct: 94  CFFLPKCRCSPDSISTSFSLFSSSSSLVYSSPHTTESFGKRNEGD 138


>Z73912-1|CAA98145.1|  465|Caenorhabditis elegans Hypothetical
           protein ZK524.1 protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 538 VYVFFCTSFLVIHIV**VTLDRLLNVFFIK 627
           +Y FF  S L++H +  VT   L++VF+++
Sbjct: 153 IYAFFSNSSLILHQIFVVTNCSLISVFYLR 182


>Z14067-1|CAA78450.1|  465|Caenorhabditis elegans putative integral
           membrane protein protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 538 VYVFFCTSFLVIHIV**VTLDRLLNVFFIK 627
           +Y FF  S L++H +  VT   L++VF+++
Sbjct: 153 IYAFFSNSSLILHQIFVVTNCSLISVFYLR 182


>Z14066-1|CAA78449.1|  465|Caenorhabditis elegans putative integral
           membrane protein protein.
          Length = 465

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 538 VYVFFCTSFLVIHIV**VTLDRLLNVFFIK 627
           +Y FF  S L++H +  VT   L++VF+++
Sbjct: 153 IYAFFSNSSLILHQIFVVTNCSLISVFYLR 182


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +1

Query: 496 AINPSFFFNSFLMCVYVF--FCTSFLVIHIV 582
           AI  + FF + L+C ++F  F  SFL +HIV
Sbjct: 174 AIYRNNFFRASLVCPFIFFIFMLSFLYMHIV 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,663,941
Number of Sequences: 27780
Number of extensions: 341440
Number of successful extensions: 972
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)