Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f14
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical pr...    71   9e-13
AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical...    33   0.28 
U88169-12|AAB42231.1|  419|Caenorhabditis elegans Hypothetical p...    30   1.5  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    29   3.5  
U40952-12|AAA81745.1|  297|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z50755-2|CAA90633.1|  444|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z83219-1|CAB05694.1|  322|Caenorhabditis elegans Hypothetical
           protein C31C9.2 protein.
          Length = 322

 Score = 70.9 bits (166), Expect = 9e-13
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
 Frame = +2

Query: 287 REEILKLIPGCSALVWISNLPITNEILDAAGAQLKIVSTVSAGYNHCNPEELRARGIQLT 466
           ++E+L  +P   A++  S   IT E+L A+  +LK+V     G ++ +     A  I + 
Sbjct: 37  KDELLVTLPQHDAVIVRSATKITAELLAASAGKLKLVGRAGTGVDNIDVPAASANKILVM 96

Query: 467 NTPNVLSPAVAEVAVGLILSASRRFTENLDQVRRGEWEIGFDKVLGQDLRDSTVGIIGLG 646
           NTP   S + AE+   LILS SR   +    ++ G+W       +G+++   T+ ++GLG
Sbjct: 97  NTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKW--ARKDFMGEEVYGRTLAVLGLG 154

Query: 647 GIGQAVVKRLS--GFDVARFIYSGHREKPEAK 736
            IG  V  RL   G  V  F     +E+ EAK
Sbjct: 155 RIGSEVAVRLQAFGMKVIGFDPMVTKEQAEAK 186


>AL032637-15|CAA21616.2|  370|Caenorhabditis elegans Hypothetical
           protein Y43F8C.16 protein.
          Length = 370

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 29/122 (23%), Positives = 47/122 (38%)
 Frame = -3

Query: 693 ATSKPLRRLTTACPIPPKPMIPTVLSRRSCPRTLSKPISHSPLRT*SRFSVNLLEADSMS 514
           ATS     +TT+   PP  +  T  ++ +   T++   S  P  T    + +     S  
Sbjct: 147 ATSTSTTSITTSTLSPPSTVQSTTTAKPTTTSTITPTTSADPTST---ITTSTTPNPSSP 203

Query: 513 PTATSATAGDRTFGVFVSCIPRARNSSGLQWL*PAETVLTIFSCAPAASRISFVIGRLEI 334
            T  S T  + T  +  + +P +  +S +Q    AE   TI S     S  S +   L  
Sbjct: 204 STVQSTTTAEPTSTITSTTVPESSTTSVVQSTTTAEPTSTITSTTVPESSTSLLTSTLAS 263

Query: 333 QT 328
            T
Sbjct: 264 TT 265


>U88169-12|AAB42231.1|  419|Caenorhabditis elegans Hypothetical
           protein T03F1.1 protein.
          Length = 419

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 611 LRDSTVGIIGLGGIGQAVVKRLSGFDVARFI 703
           +R+ TV ++G+GG+G  V + L+   + + I
Sbjct: 82  IREKTVAVVGVGGVGSVVAEMLTRCGIGKLI 112


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +2

Query: 23  TANTYLSMLIYKKVLCRFPAMITRFTQLYIGLLVAIPCLATNGTMTKNLKVLVSSNDY 196
           T  +++S+L   + LC F +  TRF + + G L  +  L         +K L + NDY
Sbjct: 100 TTFSFISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYPLLPGICYASTIKYLCAPNDY 157


>U40952-12|AAA81745.1|  297|Caenorhabditis elegans Hypothetical
           protein C03B1.1 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 221 EDHFTVLQSRYLNFGQEGSTLGREEILKLIPGCSALVWISNL 346
           ED +TV    + N G + STL  ++I  +   C A   ++N+
Sbjct: 190 EDQYTVFDQLFDNLGSDASTLMEQQIELMRNYCQAKAELTNM 231


>Z50755-2|CAA90633.1|  444|Caenorhabditis elegans Hypothetical
           protein R12H7.2 protein.
          Length = 444

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 530 SRRFTENLDQV---RRGEWEIGFDKVLGQDLRDSTVGIIGLGGIGQAVV 667
           SRR+ E +  V   R+G W+   DKV+G  +   + G   +   G +++
Sbjct: 256 SRRYVEPITYVPVTRKGYWQFKMDKVVGSGVLGCSNGCQAIADTGTSLI 304


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,950,080
Number of Sequences: 27780
Number of extensions: 361230
Number of successful extensions: 1151
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)