Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f12
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical pr...   116   1e-26
AC024819-4|AAU20828.1|  469|Caenorhabditis elegans Hypothetical ...    32   0.31 
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    32   0.31 
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AL117204-1|CAB55141.1|  328|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z78239-3|CAI79143.1|  309|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AL132862-16|CAB60550.1|  305|Caenorhabditis elegans Hypothetical...    28   5.0  
AF025457-2|AAB70965.2|  195|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z82077-6|CAB63334.1|  175|Caenorhabditis elegans Hypothetical
           protein W09C5.8 protein.
          Length = 175

 Score =  116 bits (279), Expect = 1e-26
 Identities = 57/147 (38%), Positives = 82/147 (55%)
 Frame = +3

Query: 69  RIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKAL 248
           +   R+ VGYG NG   Y+D   + +PA+RF++    I  +R KE+ DWK L  EEKK L
Sbjct: 29  KAAGRELVGYGANGDNIYQDRLDYWYPAIRFRKEDSVIAPIRAKEQADWKNLSAEEKKLL 88

Query: 249 YRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQ 428
           YR SF QT +EF+  TG WK+I   +L  L    +  +  +  VY  LP +   E ++AQ
Sbjct: 89  YRYSFRQTLSEFEAPTGYWKVISAVILSVLGLCTYYAVLLNVCVYPELPPTFQNEYKEAQ 148

Query: 429 LRRMLELRVNPIDGLSSKWDYDNDRWK 509
           + R L L      G  + +DY+N +WK
Sbjct: 149 VERALVLEKGQFLGAPTHYDYENKKWK 175


>AC024819-4|AAU20828.1|  469|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3b protein.
          Length = 469

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 353 PKGKRQSDKQISQDEFPFSCIVLKFGEGLTERSTI*RFLLFAAEEFPISLLFLAQ 189
           P+       + S   F   C+VLK  E + E  T  R+ LF A+E P ++  L +
Sbjct: 114 PRCMSSLSSEESMGSFILDCVVLKLAENIEEIMTAVRYSLFYAQESPENIRKLVE 168


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 353 PKGKRQSDKQISQDEFPFSCIVLKFGEGLTERSTI*RFLLFAAEEFPISLLFLAQ 189
           P+       + S   F   C+VLK  E + E  T  R+ LF A+E P ++  L +
Sbjct: 568 PRCMSSLSSEESMGSFILDCVVLKLAENIEEIMTAVRYSLFYAQESPENIRKLVE 622


>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein
            C16A3.7 protein.
          Length = 1119

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 102  VNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKALYR 254
            ++ + NYK   + P PAV  K+      + +E+ +G  K L C EK  + R
Sbjct: 947  ISDLVNYKGALKTPGPAVIRKDIMDQALSKKEETEGLMKPLRCTEKMVVRR 997


>AL117204-1|CAB55141.1|  328|Caenorhabditis elegans Hypothetical
           protein Y116A8C.1 protein.
          Length = 328

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 256 LLSVRPSPNFSTIQENGNSSWDICLSLCLF 345
           L+ +  SPN + I E  + SWD CL  C +
Sbjct: 26  LVLIWGSPNDTEISETYSGSWDECLQKCYY 55


>Z78239-3|CAI79143.1|  309|Caenorhabditis elegans Hypothetical
           protein C30G7.5 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 213 WKLLCCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMI 362
           W LL    K      S C    E+++Y G   +ILG ++I LS  F+  I
Sbjct: 155 WFLLSPPSKVPDCGTSGCFVSYEYRYYWGISNMILGLIVIILSLSFFFKI 204


>AL132862-16|CAB60550.1|  305|Caenorhabditis elegans Hypothetical
           protein Y73F8A.22 protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 256 LLSVRPSPNFSTIQENGNSSWDICLSLC 339
           L+ +  SPN + I E  + SWD CL  C
Sbjct: 26  LVLIWGSPNDTEISETYSGSWDECLQKC 53


>AF025457-2|AAB70965.2|  195|Caenorhabditis elegans Hypothetical
           protein C08E3.4 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 435 RMLELRVNPIDGLSSKWDYDNDRWKQ*KVF 524
           R+ +L +N +DG   K   D D+WKQ ++F
Sbjct: 67  RLKKLILNGLDGQEYKQLIDLDQWKQARIF 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,162
Number of Sequences: 27780
Number of extensions: 333960
Number of successful extensions: 931
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)