Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f04
         (607 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0462 + 9583558-9584910                                           31   0.71 
06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050     29   2.9  

>09_02_0462 + 9583558-9584910
          Length = 450

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +2

Query: 164 PKQKKLAEKDEKNLPRTETGQYSK---KDLELKKIRHEVVKFGMSGFDPTKKEEA 319
           P+QKK A KD+K + R E  +  +    D E+KK++ E  K G S    + K  A
Sbjct: 147 PEQKKGAGKDKKAMRRAEKERLKEGEAADEEMKKLKKEAKKKGASKESTSSKSGA 201


>06_03_1357 + 29543922-29545058,29545632-29545784,29545904-29546050
          Length = 478

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 360 FGGFAPRLTIRAILASSFFVGSKPDIPNLTTSWRIFFNSKSFFEYCPV 217
           FG     L   A+L      G  PD+   TT  + F  +K F + CP+
Sbjct: 411 FGTAGRHLEALAVLQHIKDSGMSPDVVTYTTLMKAFMRAKKFEKACPL 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,624,000
Number of Sequences: 37544
Number of extensions: 157201
Number of successful extensions: 373
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)