Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte26f04
         (607 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical p...    35   0.052
Z92826-3|CAB07321.1|  193|Caenorhabditis elegans Hypothetical pr...    33   0.12 
U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z70034-11|CAA93853.2|  364|Caenorhabditis elegans Hypothetical p...    29   3.4  
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p...    28   4.5  
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p...    28   4.5  
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p...    28   4.5  
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p...    28   4.5  
AF067217-3|AAF99975.3|  479|Caenorhabditis elegans Hypothetical ...    28   4.5  
AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical...    28   4.5  

>Z35663-11|CAA84732.2|  791|Caenorhabditis elegans Hypothetical
           protein T04A8.13 protein.
          Length = 791

 Score = 34.7 bits (76), Expect = 0.052
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +2

Query: 161 KPKQKKLAEKDEKNLP-RTETGQYSKKD-LELKKIRHEVVKFGMSGFDPTKKEEAKIALM 334
           K K+KK  +KDEK    +TE  +  +K+  + +K++ +  K   SG D  KKE +     
Sbjct: 140 KKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKEDPKKDDKSGVDTIKKEGSTAPAS 199

Query: 335 VSLGAKPPKK 364
            +L   PP++
Sbjct: 200 TALVPPPPRQ 209


>Z92826-3|CAB07321.1|  193|Caenorhabditis elegans Hypothetical
           protein C18D11.3 protein.
          Length = 193

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +2

Query: 314 EAKIALMVSLGAKPPKKQYINYKEL 388
           EA+  ++ SLGA P K+ Y+NYK+L
Sbjct: 133 EARERMLASLGAAPAKRGYVNYKDL 157


>U21323-7|AAA62551.1|  465|Caenorhabditis elegans Hypothetical
           protein C45G9.8 protein.
          Length = 465

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 158 YKPKQKKLAEKDEKNLPRTETGQYSK-KDLE 247
           YK ++KK AEK E NL     GQ  K KD++
Sbjct: 282 YKSREKKKAEKSESNLEEDTYGQVPKLKDVQ 312


>Z70034-11|CAA93853.2|  364|Caenorhabditis elegans Hypothetical
           protein C18E9.2a protein.
          Length = 364

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +2

Query: 140 VVEFESYKPKQKKLA---EKDEKNLPRTETGQYSKKDLELKKIRHEVVKF 280
           VVE  + K K+++ A   E DEK + + E     KK  ++K + HEV  F
Sbjct: 121 VVEKRNKKAKEEETATEAEGDEKEVKKDEKKDEEKKKKKVKLLVHEVQAF 170


>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
           protein F35D11.11a protein.
          Length = 1840

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +2

Query: 167 KQKKLAEKDEKNLPRTETGQYSKKDLELKKIRHEVVKFG--MSGFDPTKKEEAKIALMVS 340
           K++K   KD++   R  +  YS+++ +LKK+  E+ K    +   +  ++ + K+ + V 
Sbjct: 377 KEEK-RRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQ 435

Query: 341 LGAKPPKKQYINY-KELM 391
                  +Q+  + +ELM
Sbjct: 436 NSLNEAHRQHKQFIEELM 453


>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
           protein F35D11.11c protein.
          Length = 1898

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +2

Query: 167 KQKKLAEKDEKNLPRTETGQYSKKDLELKKIRHEVVKFG--MSGFDPTKKEEAKIALMVS 340
           K++K   KD++   R  +  YS+++ +LKK+  E+ K    +   +  ++ + K+ + V 
Sbjct: 377 KEEK-RRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQ 435

Query: 341 LGAKPPKKQYINY-KELM 391
                  +Q+  + +ELM
Sbjct: 436 NSLNEAHRQHKQFIEELM 453


>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
           protein F35D11.11d protein.
          Length = 1671

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +2

Query: 167 KQKKLAEKDEKNLPRTETGQYSKKDLELKKIRHEVVKFG--MSGFDPTKKEEAKIALMVS 340
           K++K   KD++   R  +  YS+++ +LKK+  E+ K    +   +  ++ + K+ + V 
Sbjct: 137 KEEK-RRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQ 195

Query: 341 LGAKPPKKQYINY-KELM 391
                  +Q+  + +ELM
Sbjct: 196 NSLNEAHRQHKQFIEELM 213


>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
           protein F35D11.11b protein.
          Length = 1911

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
 Frame = +2

Query: 167 KQKKLAEKDEKNLPRTETGQYSKKDLELKKIRHEVVKFG--MSGFDPTKKEEAKIALMVS 340
           K++K   KD++   R  +  YS+++ +LKK+  E+ K    +   +  ++ + K+ + V 
Sbjct: 377 KEEK-RRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQ 435

Query: 341 LGAKPPKKQYINY-KELM 391
                  +Q+  + +ELM
Sbjct: 436 NSLNEAHRQHKQFIEELM 453


>AF067217-3|AAF99975.3|  479|Caenorhabditis elegans Hypothetical
           protein F56A6.4 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 167 KQKKLAEKDEKNLPRTETGQYSKKDLELKKIRHEV 271
           K++K  EKD+K        +  +KD E +KI  E+
Sbjct: 148 KERKTLEKDKKKSEMARRREEKEKDKETRKIEREI 182


>AF047659-10|AAC04430.1|  798|Caenorhabditis elegans Hypothetical
           protein K07H8.10 protein.
          Length = 798

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +2

Query: 140 VVEFESYKPKQKKLAEKDE-KNLPRTE--TGQYSKKDLELKK 256
           + E E  +PKQKKL +K E K +PR +    Q+ K   + KK
Sbjct: 757 IQEVEEEQPKQKKLVKKVEPKTIPRVQQKKPQFKKTGFKGKK 798


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,913,629
Number of Sequences: 27780
Number of extensions: 159596
Number of successful extensions: 637
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)